RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 OR8U9P0C7N5 309 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 ARSBP15848 533 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 ALOX5APP20292 161 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 VDAC1P21796 283 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 DUSP1P28562 367 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 PTGFRP43088 359 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 NPBWR2P48146 333 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 ZP1P60852 638 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 AESQ08117 197 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 ZNF816Q0VGE8 651 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 METTL21CQ5VZV1 264 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 C8orf82Q6P1X6 216 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 RASSF6Q6ZTQ3 369 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 TMEM104Q8NE00 496 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 OR14K1Q8NGZ2 314 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 LEAP2Q969E1 77 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 S1PR3Q99500 378 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 BTBD10Q9BSF8 475 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 PBOV1Q9GZY1 135 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 TOLLIPQ9H0E2 274 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 GID8Q9NWU2 228 aa5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 AMMECR1Q9Y4X0 333 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-206ENST00000563343 FAT2Q9NYQ8 4349 aa5.9□□□□□ -1.47
HERPUD1-206ENST00000563343 DNAH6Q9C0G6 4158 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 hCG_2014768A0A024R1R8 64 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 IGHV3-72A0A0B4J1Y9 119 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 IGHV1-3A0A0C4DH29 117 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 ODAMA1E959 279 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 A6NIN4 97 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 ZNF729A6NN14 1252 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 NCBP2LA6PVI3 153 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 LINC01619G3V211 115 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 GSC2O15499 205 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 MPZL2O60487 215 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 IGHV3-7P01780 117 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 CSN2P05814 226 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 RAB9AP51151 201 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 SMIM11AP58511 58 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 MFGE8Q08431 387 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 MADCAM1Q13477 382 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 KPNB1Q14974 876 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 ENTHD1Q8IYW4 607 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 OR9Q2Q8NGE9 314 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 OR4D6Q8NGJ1 314 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 EMG1Q92979 244 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 FAM162AQ96A26 154 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 TSSK6Q9BXA6 273 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 LINC00574Q9H8X3 128 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 TMBIM4Q9HC24 238 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 CMC2Q9NRP2 79 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 RBFOX1Q9NWB1 397 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 FAM53CQ9NYF3 392 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 NUFIP1Q9UHK0 495 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 PSG11Q9UQ72 335 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 AP3M1Q9Y2T2 418 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 CEPT1Q9Y6K0 416 aa5.89□□□□□ -1.47
HERPUD1-206ENST00000563343 PKD1P98161 4303 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 DNAH2Q9P225 4427 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 DYNC1H1Q14204 4646 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 TRBV2A0A0J9YWF9 115 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 KBTBD11-OT1A0A1B0GTJ5 212 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 A0A1B0GVY2 172 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 TMEM269A0A1B0GVZ9 245 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 FAM230AA0A1W2PPH8 454 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 G3V318 75 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 SIRPB1O00241 398 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 GSTA4O15217 222 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 SOX15O60248 233 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 INMTO95050 263 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 OR2H2O95918 312 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 GASTP01350 101 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 LGALS1P09382 135 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 OR5H8P0DN80 308 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 MED14OSP0DP75 135 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 ZNF3P17036 446 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 NFYBP25208 207 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 RRM2P31350 389 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 IFNGR2P38484 337 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 NUDT2P50583 147 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 HCCSP53701 268 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 F2RL1P55085 397 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 CDC42P60953 191 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 CBX1P83916 185 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 PITPNAQ00169 270 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 EWSR1Q01844 656 aaKnown RBP eCLIP5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 UBE2V2Q15819 145 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 C19orf54Q5BKX5 351 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 DEGS2Q6QHC5 323 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 SLC25A26Q70HW3 274 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 ARPINQ7Z6K5 226 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 COMMD2Q86X83 199 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 PGAM4Q8N0Y7 254 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 OR2T10Q8NGZ9 312 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 RP9Q8TA86 221 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 TMEM106AQ96A25 262 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 RCN3Q96D15 328 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 OR4C12Q96R67 309 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 CHCHD6Q9BRQ6 235 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 PPIL3Q9H2H8 161 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 SAR1AQ9NR31 198 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms