RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TFF3Q07654 80 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 CHRFAM7AQ494W8 412 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 LAMTOR1Q6IAA8 161 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 OVCH2Q7RTZ1 564 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 SLC36A1Q7Z2H8 476 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 SEC22CQ9BRL7 303 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 SPACA1Q9HBV2 294 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 C12orf4Q9NQ89 552 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 ANXA10Q9UJ72 324 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 PLCE1Q9P212 2302 aa15.24■□□□□ 0.03
COMMD4-208ENST00000563220 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-208ENST00000563220 OR2H2O95918 312 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 ZNF44P15621 663 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 OR3A3P47888 321 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 TAS2R46P59540 309 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 GLDNQ6ZMI3 551 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-208ENST00000563220 NEUROG1Q92886 237 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 DPCDQ9BVM2 203 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-208ENST00000563220 RANBP3Q9H6Z4 567 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-208ENST00000563220 VSIG4Q9Y279 399 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 hCG_1807616A0A1W2PRN6 198 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 ANKRD34BA5PLL1 514 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 H3BUI4 141 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 PRAF2O60831 178 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 NAPSAO96009 420 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 IGHV1-46P01743 117 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 IL5P05113 134 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 SORDQ00796 357 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 ZMYND11Q15326 602 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 ATPAF1Q5TC12 328 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-208ENST00000563220 ACP7Q6ZNF0 438 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 ZNF767PQ75MW2 155 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 ARRDC1Q8N5I2 433 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 GALNT11Q8NCW6 608 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 ITLN1Q8WWA0 313 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 DACT3Q96B18 629 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-208ENST00000563220 CNTNAP3BQ96NU0 1288 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 CNTNAP3Q9BZ76 1288 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 FN3KRPQ9HA64 309 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 EHFQ9NZC4 300 aa15.23■□□□□ 0.03
COMMD4-208ENST00000563220 DIDO1Q9BTC0 2240 aaKnown RBP15.22■□□□□ 0.03
COMMD4-208ENST00000563220 E7EQL1 145 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 SIRPB1O00241 398 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 ANXA3P12429 323 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 GLRA1P23415 457 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 TSPAN5P62079 268 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 TLE1Q04724 770 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 C4orf17Q53FE4 359 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 OR11H7Q8NGC8 314 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 TERB2Q8NHR7 220 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 NEK7Q8TDX7 302 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 LRRC29Q8WV35 223 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 LRRC46Q96FV0 321 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 PPA2Q9H2U2 334 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 ICE1Q9Y2F5 2266 aa15.22■□□□□ 0.03
COMMD4-208ENST00000563220 USP24Q9UPU5 2620 aa15.21■□□□□ 0.03
COMMD4-208ENST00000563220 TMEM82A0PJX8 343 aa15.21■□□□□ 0.03
COMMD4-208ENST00000563220 SLC33A1O00400 549 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-208ENST00000563220 FABP7O15540 132 aa15.21■□□□□ 0.03
COMMD4-208ENST00000563220 SIAH2O43255 324 aa15.21■□□□□ 0.03
COMMD4-208ENST00000563220 GLAP06280 429 aa15.21■□□□□ 0.03
COMMD4-208ENST00000563220 CEBPDP49716 269 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-208ENST00000563220 SPIN3Q5JUX0 258 aa15.21■□□□□ 0.03
COMMD4-208ENST00000563220 METTL11BQ5VVY1 283 aa15.21■□□□□ 0.03
COMMD4-208ENST00000563220 MOGAT3Q86VF5 341 aa15.21■□□□□ 0.03
COMMD4-208ENST00000563220 C9orf62Q8N4C0 152 aa15.21■□□□□ 0.03
COMMD4-208ENST00000563220 MED30Q96HR3 178 aa15.21■□□□□ 0.03
COMMD4-208ENST00000563220 CHMP1AQ9HD42 196 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-208ENST00000563220 CACNA1BQ00975 2339 aa15.21■□□□□ 0.02
COMMD4-208ENST00000563220 TUBAL3A6NHL2 446 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 SH2D1BO14796 132 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 HAND1O96004 215 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 PLAUP00749 431 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 CD3EP07766 207 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 SULT1A3P0DMM9 295 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 SULT1A4P0DMN0 295 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 EGR1P18146 543 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 ARPC4P59998 168 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 C20orf204Q6ZNR8 217 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 C17orf107Q6ZR85 190 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 C5orf24Q7Z6I8 188 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 LHFPL1Q86WI0 220 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 OR52B4Q8NGK2 314 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 ALX4Q9H161 411 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-208ENST00000563220 ZNF286AQ9HBT8 521 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 OR14J1Q9UGF5 321 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 CFHR2P36980 270 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 TNFAIP6P98066 277 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-208ENST00000563220 GRK1Q15835 563 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 AADACL3Q5VUY0 350 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 TMED4Q7Z7H5 227 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 MARCH1Q8TCQ1 289 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 Q9N2K0 584 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 IL19Q9UHD0 177 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 ZDHHC8Q9ULC8 765 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 HSPB11Q9Y547 144 aa15.2■□□□□ 0.02
COMMD4-208ENST00000563220 ROS1P08922 2347 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 MEIKINA0A087WXM9 373 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 SMLR1H3BR10 107 aa15.19■□□□□ 0.02
COMMD4-208ENST00000563220 ZG16O60844 167 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms