RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 PPYP01298 95 aa18.23■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SMCO1Q147U7 214 aa18.23■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 ACSF3Q4G176 576 aaPredicted RBP18.23■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 UNQ6126/PRO20091Q6UXV3 157 aa18.23■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 OR5T2Q8NGG2 359 aa18.23■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 OR1S1Q8NH92 325 aa18.23■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 OR5AC2Q9NZP5 309 aa18.23■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 TUBD1Q9UJT1 453 aa18.23■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 POLDIP2Q9Y2S7 368 aa18.23■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 TRBV6-6A0A0A6YYG2 114 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 TRDCB7Z8K6 153 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SLC34A2O95436 690 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 TPT1P13693 172 aaKnown RBP18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 NBL1P41271 181 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 S100A10P60903 97 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 GGNBP1Q5YKI7 109 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 IGFL3Q6UXB1 125 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SUMF2Q8NBJ7 301 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 OR2J1Q9GZK6 312 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 IL36RNQ9UBH0 155 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 FBXO9Q9UK97 447 aaPredicted RBP18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 OR5AC1P0C628 307 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 TUBG1P23258 451 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 UCP2P55851 309 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SNTB1Q13884 538 aaKnown RBP18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 PHLDA2Q53GA4 152 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 LIAT1Q6ZQX7 453 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 MYPOPQ86VE0 399 aaPredicted RBP18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 LGI3Q8N145 548 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 LRRC20Q8TCA0 184 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 RRNAD1Q96FB5 475 aaKnown RBP18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 CNTNAP3BQ96NU0 1288 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 CNTNAP3Q9BZ76 1288 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SHARPINQ9H0F6 387 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 TUBG2Q9NRH3 451 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 ATP23Q9Y6H3 246 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 FREM2Q5SZK8 3169 aa18.22■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 A0A1W2PR80 420 aa18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 IQCF6A8MYZ5 107 aa18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 ZNF205O95201 554 aa18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SRPXP78539 464 aa18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 PAN3Q58A45 887 aaKnown RBP18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 IGSF11Q5DX21 431 aa18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 FAM76BQ5HYJ3 339 aa18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 HSD17B13Q7Z5P4 300 aaPredicted RBP18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 OR1J1Q8NGS3 322 aa18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SLC25A40Q8TBP6 338 aa18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 MRPL24Q96A35 216 aaKnown RBP18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 PLSCR4Q9NRQ2 329 aa18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 ZFP57Q9NU63 452 aa18.21■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 TM4SF5O14894 197 aa18.2■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 VWA1Q6PCB0 445 aa18.2■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 C17orf78Q8N4C9 275 aa18.2■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 ZNF565Q8N9K5 539 aa18.2■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 RELL2Q8NC24 303 aaPredicted RBP18.2■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 ZNF488Q96MN9 340 aa18.2■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 ADAT1Q9BUB4 502 aaKnown RBP18.2■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 OBP2BQ9NPH6 170 aa18.2■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 MED12LQ86YW9 2145 aa18.2■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 TMEM210A6NLX4 147 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 H7C1Q1 480 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 TAAR5O14804 337 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 DUSP1P28562 367 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 EIF5AP63241 154 aaKnown RBP18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 EIF4E3Q8N5X7 224 aaKnown RBP18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 CCDC120Q96HB5 630 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 C18orf12Q96KH6 178 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 DNTTIP1Q9H147 329 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 DLL3Q9NYJ7 618 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 DEGS1O15121 323 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 WISP2O76076 250 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 IGKV3-15P01624 115 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 MDH2P40926 338 aaKnown RBP18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 RND3P61587 244 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 SP6Q3SY56 376 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 WDR31Q8NA23 367 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 MRPL30Q8TCC3 161 aaKnown RBP18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 PROCRQ9UNN8 238 aa18.19■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 TRAV24A0A0B4J272 114 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 HSPB6O14558 160 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 MPPED1O15442 326 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 KCNAB3O43448 404 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 ZNF250P15622 560 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 ZP3P21754 424 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 TSC22D1Q15714 1073 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 ZNF585AQ6P3V2 769 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 BAP18Q8IXM2 172 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 SCCPDHQ8NBX0 429 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 TAAR6Q96RI8 345 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 DMRTA2Q96SC8 542 aa18.18■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.17■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 KRBOX1C9JBD0 128 aa18.17■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 HS3ST1O14792 307 aa18.17■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 BET1O15155 118 aa18.17■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 PHF1O43189 567 aaPredicted RBP18.17■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 DEDDO75618 318 aa18.17■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 RHBDL1O75783 438 aa18.17■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 TUSC2O75896 110 aa18.17■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 FGF2P09038 288 aa18.17■□□□□ 0.5
VPS9D1-AS1-202ENST00000562866 SCTP09683 121 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms