RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 FAM120AOSQ5T036 256 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 DCAF12L2Q5VW00 463 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 GPR107Q5VW38 600 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 FAHD2BQ6P2I3 314 aaPredicted RBP8.06□□□□□ -1.12
CLK3-208ENST00000562626 OR8H2Q8N162 312 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 BPIFB2Q8N4F0 458 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 C11orf42Q8N5U0 333 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 Q8N7P7 452 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 C8orf46Q8TAG6 207 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 FOXRED1Q96CU9 486 aaPredicted RBP8.06□□□□□ -1.12
CLK3-208ENST00000562626 FAHD2AQ96GK7 314 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 MED30Q96HR3 178 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 SNX22Q96L94 193 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 KCTD7Q96MP8 289 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 TBX15Q96SF7 602 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 SELENOIQ9C0D9 397 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 SIRPDQ9H106 197 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 SEBOXQ9HB31 216 aaPredicted RBP8.06□□□□□ -1.12
CLK3-208ENST00000562626 ING3Q9NXR8 418 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 KCNS2Q9ULS6 477 aa8.06□□□□□ -1.12
CLK3-208ENST00000562626 IGHV3OR16-10A0A075B7F0 116 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 TRAV39A0A0B4J263 110 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 PPIAL4CA0A0B4J2A2 164 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 A0A0G2JMP0 313 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 A0A0X1KG70 313 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 FOXI3A8MTJ6 420 aaPredicted RBP8.05□□□□□ -1.12
CLK3-208ENST00000562626 SH2D1BO14796 132 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 DEGS1O15121 323 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 GABARAPO95166 117 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 BPNT1O95861 308 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 FSHBP01225 129 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 CSTBP04080 98 aaKnown RBP8.05□□□□□ -1.12
CLK3-208ENST00000562626 GTF2F2P13984 249 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 SNRPBP14678 240 aaKnown RBP8.05□□□□□ -1.12
CLK3-208ENST00000562626 CPT2P23786 658 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 GABRR1P24046 479 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 GLIPR1P48060 266 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 DLX6P56179 175 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 ARF6P62330 175 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 AESQ08117 197 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 GRK1Q15835 563 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 MOGAT2Q3SYC2 334 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 UTF1Q5T230 341 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 Q6ZPA2 131 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 C5orf24Q7Z6I8 188 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 ANKRD13BQ86YJ7 626 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 SUMF2Q8NBJ7 301 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 OR4M2Q8NGB6 313 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 OR5H6Q8NGV6 325 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 NDNFQ8TB73 568 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 FAM3DQ96BQ1 224 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 S100A13Q99584 98 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 BARHL1Q9BZE3 327 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 FAM234AQ9H0X4 552 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 LPAR5Q9H1C0 372 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 C7orf69Q9H7B7 122 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 RHOFQ9HBH0 211 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 RCC2Q9P258 522 aaKnown RBP8.05□□□□□ -1.12
CLK3-208ENST00000562626 STEAP1Q9UHE8 339 aa8.05□□□□□ -1.12
CLK3-208ENST00000562626 NOTOA8MTQ0 251 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 AIPO00170 330 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 PDCD5O14737 125 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 SOCS1O15524 211 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 ENSAO43768 121 aaKnown RBP8.04□□□□□ -1.12
CLK3-208ENST00000562626 ZNF780AO75290 641 aaPredicted RBP8.04□□□□□ -1.12
CLK3-208ENST00000562626 MMP23AO75900 390 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 OR7C1O76099 320 aaPredicted RBP8.04□□□□□ -1.12
CLK3-208ENST00000562626 PAHP00439 452 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 PPIAL4GP0DN37 164 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 IGHV4-38-2P0DP08 117 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 ARSBP15848 533 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 GDNFP39905 211 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 SERPINB10P48595 397 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 EDDM3BP56851 147 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 RPL31P62899 125 aaKnown RBP8.04□□□□□ -1.12
CLK3-208ENST00000562626 RPS27AP62979 156 aaKnown RBP8.04□□□□□ -1.12
CLK3-208ENST00000562626 KLRD1Q13241 179 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 PAN3Q58A45 887 aaKnown RBP8.04□□□□□ -1.12
CLK3-208ENST00000562626 ATAD3CQ5T2N8 411 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 RSBN1Q5VWQ0 802 aaPredicted RBP8.04□□□□□ -1.12
CLK3-208ENST00000562626 OLFML2AQ68BL7 652 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 TMEM200BQ69YZ2 307 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 HCP5Q6MZN7 132 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 SFXN4Q6P4A7 337 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 FIP1L1Q6UN15 594 aaKnown RBP8.04□□□□□ -1.12
CLK3-208ENST00000562626 BAIAP2L2Q6UXY1 529 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 GDPGP1Q6ZNW5 385 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 GPR141Q7Z602 305 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 FAM185AQ8N0U4 392 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 LGALS14Q8TCE9 139 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 SULT4A1Q9BR01 284 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 DPCDQ9BVM2 203 aaPredicted RBP8.04□□□□□ -1.12
CLK3-208ENST00000562626 TM2D1Q9BX74 207 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 IFT22Q9H7X7 185 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 LIN7BQ9HAP6 207 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 DAPK2Q9UIK4 370 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 NBEAL1Q6ZS30 2694 aa8.04□□□□□ -1.12
CLK3-208ENST00000562626 A0A1W2PQ09 198 aa8.03□□□□□ -1.12
CLK3-208ENST00000562626 MGST3O14880 152 aa8.03□□□□□ -1.12
CLK3-208ENST00000562626 ECDO95905 644 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms