RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 IGKV3-11P04433 115 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 CEACAM1P13688 526 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 TMEM11P17152 192 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 CDKN1BP46527 198 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 SNU13P55769 128 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 GNB2P62879 340 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 GABREP78334 506 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 ROM1Q03395 351 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 PNRC1Q12796 327 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 C1orf140Q5VVS0 124 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 SULF2Q8IWU5 870 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 STT3BQ8TCJ2 826 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 GPR119Q8TDV5 335 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 TBX15Q96SF7 602 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 BANF2Q9H503 90 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 IGKV3D-11A0A0A0MRZ8 115 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 IFI6P09912 130 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 CEACAM8P31997 349 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 RAB7AP51149 207 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 ZFP36L1Q07352 338 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 SP6Q3SY56 376 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 FAM90A2PQ658T7 463 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 RNF144BQ7Z419 303 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 ADIPOR1Q96A54 375 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 CLDN23Q96B33 292 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 C8orf44Q96CB5 159 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 ZNF501Q96CX3 271 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 ARHGAP5-AS1Q96IT6 56 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 ANGPTL4Q9BY76 406 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 PCED1AQ9H1Q7 454 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 MMP25Q9NPA2 562 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 ADAMTS9Q9P2N4 1935 aa12.22□□□□□ -0.45
GTF3C1-203ENST00000562609 GPR179Q6PRD1 2367 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 C20orf202A1L168 122 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 BLACEA4D250 179 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 TMEM14DPA8MWL7 114 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 B4E171 279 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 HSD11B1P28845 292 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 TMEM50BP56557 158 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 ERVS71-1P61550 626 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 KCNMB1Q16558 191 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 CLEC12BQ2HXU8 276 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 EMC4Q5J8M3 183 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 LEMD1Q68G75 181 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 SDSLQ96GA7 329 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 MIEN1Q9BRT3 115 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 P4HTMQ9NXG6 502 aa12.21□□□□□ -0.45
GTF3C1-203ENST00000562609 IL33O95760 270 aa12.21□□□□□ -0.46
GTF3C1-203ENST00000562609 EGR4Q05215 589 aa12.21□□□□□ -0.46
GTF3C1-203ENST00000562609 COL5A1-AS1Q5SY13 56 aa12.21□□□□□ -0.46
GTF3C1-203ENST00000562609 NUFIP2Q7Z417 695 aaKnown RBP12.21□□□□□ -0.46
GTF3C1-203ENST00000562609 GBGT1Q8N5D6 347 aa12.21□□□□□ -0.46
GTF3C1-203ENST00000562609 SLC46A1Q96NT5 459 aa12.21□□□□□ -0.46
GTF3C1-203ENST00000562609 FUT9Q9Y231 359 aa12.21□□□□□ -0.46
GTF3C1-203ENST00000562609 R4GMQ9 66 aa12.21□□□□□ -0.46
GTF3C1-203ENST00000562609 TMEM265A0A087WTH1 108 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 A0A1W2PP11 408 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 SLC16A7O60669 478 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 ASAH2BP0C7U1 165 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 ZNF43P17038 809 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 CHRNB4P30926 498 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 PRSS8Q16651 343 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 HLA-DQA1Q5Y7H0 255 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 MAFAQ8NHW3 353 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 NUDT16L1Q9BRJ7 211 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 GNG13Q9P2W3 67 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 BDP1A6H8Y1 2624 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 A0A1B0GX78 115 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 C11orf98E9PRG8 122 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 NXPH2O95156 264 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 UMODP07911 640 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 DBHP09172 617 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 OMGP23515 440 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 IL12BP29460 328 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 EWSR1Q01844 656 aaKnown RBP eCLIP12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 RNF151Q2KHN1 245 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 FNDC7Q5VTL7 733 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 OR52M1Q8NGK5 317 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 OR14L1PQ8NHC6 308 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 TMEM170AQ8WVE7 144 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 RBMXL1Q96E39 390 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 OR6C1Q96RD1 312 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 CALHM2Q9HA72 323 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 SDF2L1Q9HCN8 221 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 G6PC2Q9NQR9 355 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 GPR84Q9NQS5 396 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 SLC7A11Q9UPY5 501 aa12.2□□□□□ -0.46
GTF3C1-203ENST00000562609 A0A1W2PQM1 296 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 H2BFMP0C1H6 154 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 PTTG1IPP53801 180 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 TAS2R46P59540 309 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 ZNF266Q14584 549 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 TDRG1Q3Y452 100 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 LYSMD4Q5XG99 296 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 WBP2NLQ6ICG8 309 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 GLIPR1L1Q6UWM5 242 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 LYZL2Q7Z4W2 148 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 ADAT3Q96EY9 351 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 GUCD1Q96NT3 240 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms