RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 DOK1Q99704 481 aa2.6□□□□□ -1.99
HERC1-215ENST00000561436 MRPL57Q9BQC6 102 aaKnown RBP2.6□□□□□ -1.99
HERC1-215ENST00000561436 BPESC1Q9GZL8 116 aa2.6□□□□□ -1.99
HERC1-215ENST00000561436 RACGAP1Q9H0H5 632 aa2.6□□□□□ -1.99
HERC1-215ENST00000561436 PPA2Q9H2U2 334 aa2.6□□□□□ -1.99
HERC1-215ENST00000561436 CDC42EP4Q9H3Q1 356 aaKnown RBP2.6□□□□□ -1.99
HERC1-215ENST00000561436 PIGUQ9H490 435 aa2.6□□□□□ -1.99
HERC1-215ENST00000561436 METTL17Q9H7H0 456 aaPredicted RBP2.6□□□□□ -1.99
HERC1-215ENST00000561436 CA10Q9NS85 328 aa2.6□□□□□ -1.99
HERC1-215ENST00000561436 PCTPQ9UKL6 214 aa2.6□□□□□ -1.99
HERC1-215ENST00000561436 NOSIPQ9Y314 301 aaKnown RBP2.6□□□□□ -1.99
HERC1-215ENST00000561436 TMED5Q9Y3A6 229 aa2.6□□□□□ -1.99
HERC1-215ENST00000561436 RRP15Q9Y3B9 282 aaKnown RBP2.6□□□□□ -1.99
HERC1-215ENST00000561436 RNF11Q9Y3C5 154 aa2.6□□□□□ -1.99
HERC1-215ENST00000561436 DOCK9Q9BZ29 2069 aa2.6□□□□□ -1.99
HERC1-215ENST00000561436 PKD1L1Q8TDX9 2849 aa2.6□□□□□ -1.99
HERC1-215ENST00000561436 ZNF469Q96JG9 3925 aaPredicted RBP2.59□□□□□ -1.99
HERC1-215ENST00000561436 GNG14A0A1W2PPG7 69 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 FAM231BA6NCW3 169 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 H0Y9J4 135 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 RPL36A-HNRNPH2H7BZ11 118 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 MANBAO00462 879 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 LYZL6O75951 148 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 KCNK2O95069 426 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 PDYNP01213 254 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 IL3P08700 152 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 RPS17P08708 135 aaKnown RBP2.59□□□□□ -1.99
HERC1-215ENST00000561436 OR4A8P0C604 315 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 TROVE2P10155 538 aaKnown RBP eCLIP2.59□□□□□ -1.99
HERC1-215ENST00000561436 CBR1P16152 277 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 TAC1P20366 129 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 NPR2P20594 1047 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 PRTN3P24158 256 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 FMO3P31513 532 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 IFNA8P32881 189 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 PHBP35232 272 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 RBMXP38159 391 aaKnown RBP2.59□□□□□ -1.99
HERC1-215ENST00000561436 VDAC2P45880 294 aaPredicted RBP2.59□□□□□ -1.99
HERC1-215ENST00000561436 SERPINB8P50452 374 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 SERPINB9P50453 376 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 ZNF83P51522 516 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 UBE2NP61088 152 aaKnown RBP2.59□□□□□ -1.99
HERC1-215ENST00000561436 RPS23P62266 143 aaKnown RBP2.59□□□□□ -1.99
HERC1-215ENST00000561436 UBA52P62987 128 aaKnown RBP2.59□□□□□ -1.99
HERC1-215ENST00000561436 SLC35A1P78382 337 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 NDPQ00604 133 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 DEFA6Q01524 100 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 STX5Q13190 355 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 ZNF141Q15928 474 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 KCTD21Q4G0X4 260 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 FAM71E1Q6IPT2 247 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 GRINAQ7Z429 371 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 DPPA2Q7Z7J5 298 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 RIBC1Q8N443 379 aaPredicted RBP2.59□□□□□ -1.99
HERC1-215ENST00000561436 TMEM86BQ8N661 226 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 CCDC54Q8NEL0 328 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 OR4F6Q8NGB9 312 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 OR9K2Q8NGE7 335 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 OR5M1Q8NGP8 315 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 OR9G1Q8NH87 305 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 C16orf78Q8WTQ4 265 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 POP5Q969H6 163 aaKnown RBP2.59□□□□□ -1.99
HERC1-215ENST00000561436 TUBGCP3Q96CW5 907 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 CCDC126Q96EE4 140 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 ITCHQ96J02 903 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 PLEKHA8Q96JA3 519 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 KCNA7Q96RP8 456 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 NRIP2Q9BQI9 281 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 LINC00470Q9BZP3 86 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 MFFQ9GZY8 342 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 ANKRD19PQ9H560 264 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 SIAEQ9HAT2 523 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 LZTFL1Q9NQ48 299 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 RRAGDQ9NQL2 400 aaPredicted RBP2.59□□□□□ -1.99
HERC1-215ENST00000561436 ACER3Q9NUN7 267 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 EXD2Q9NVH0 621 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 SLC2A8Q9NY64 477 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 SNX12Q9UMY4 172 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 CELA1Q9UNI1 258 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 RABL2BQ9UNT1 228 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 SLC35A3Q9Y2D2 325 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 ANKRD36A6QL64 1941 aa2.59□□□□□ -1.99
HERC1-215ENST00000561436 DSPPQ9NZW4 1301 aa2.59□□□□□ -2
HERC1-215ENST00000561436 CSPG4Q6UVK1 2322 aa2.58□□□□□ -2
HERC1-215ENST00000561436 A0A096LPI6 279 aa2.58□□□□□ -2
HERC1-215ENST00000561436 LOC102725191A0A1B0GVB3 256 aa2.58□□□□□ -2
HERC1-215ENST00000561436 ZNF716A6NP11 495 aa2.58□□□□□ -2
HERC1-215ENST00000561436 C12orf71A8MTZ7 269 aa2.58□□□□□ -2
HERC1-215ENST00000561436 M0R1B8 84 aa2.58□□□□□ -2
HERC1-215ENST00000561436 M0R233 179 aa2.58□□□□□ -2
HERC1-215ENST00000561436 HSD17B6O14756 317 aa2.58□□□□□ -2
HERC1-215ENST00000561436 SCAMP2O15127 329 aaKnown RBP2.58□□□□□ -2
HERC1-215ENST00000561436 FSTL3O95633 263 aa2.58□□□□□ -2
HERC1-215ENST00000561436 IGKV1D-16P01601 117 aa2.58□□□□□ -2
HERC1-215ENST00000561436 GIPP09681 153 aaPredicted RBP2.58□□□□□ -2
HERC1-215ENST00000561436 DNAH10OSP0CZ25 163 aa2.58□□□□□ -2
HERC1-215ENST00000561436 NEFHP12036 1026 aa2.58□□□□□ -2
HERC1-215ENST00000561436 ZNF19P17023 458 aa2.58□□□□□ -2
HERC1-215ENST00000561436 FUT3P21217 361 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms