RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 OR3A1P47881 315 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 GLIPR1P48060 266 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 RPS25P62851 125 aaKnown RBP8.29□□□□□ -1.08
HERC1-212ENST00000561348 ZNF146Q15072 292 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 LTC4SQ16873 150 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 HSD17B12Q53GQ0 312 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 KRBOX4Q5JUW0 171 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 CRIP3Q6Q6R5 217 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 GLIPR1L1Q6UWM5 242 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 C12orf54Q6X4T0 127 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 USP43Q70EL4 1123 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 PRSS48Q7RTY5 328 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 OSR2Q8N2R0 312 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 PXT1Q8NFP0 134 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 FAM46BQ96A09 425 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 ZNF714Q96N38 554 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 MGLLQ99685 303 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 SLITRK2Q9H156 845 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 BANF2Q9H503 90 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 HEXA-AS1Q9H8Q6 139 aa8.29□□□□□ -1.08
HERC1-212ENST00000561348 LSM2Q9Y333 95 aaKnown RBP8.29□□□□□ -1.08
HERC1-212ENST00000561348 MEIKINA0A087WXM9 373 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 TRGV10A0A0A0MS01 117 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 TRBV5-7A0A0A0MS05 114 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 TRAV39A0A0B4J263 110 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 BTBD17A6NE02 478 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 SLC33A1O00400 549 aaPredicted RBP8.28□□□□□ -1.08
HERC1-212ENST00000561348 GEMIN2O14893 280 aaKnown RBP8.28□□□□□ -1.08
HERC1-212ENST00000561348 IGHV4-59P01825 116 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 ARG1P05089 322 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 IGFBP3P17936 291 aaPredicted RBP8.28□□□□□ -1.08
HERC1-212ENST00000561348 NFYBP25208 207 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 PSMB9P28065 219 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 GLP1RP43220 463 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 BMXP51813 675 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 P2RX3P56373 397 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 BPIFB3P59826 476 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 BDH1Q02338 343 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 IRF3Q14653 427 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 SLC9A3R2Q15599 337 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 TAF9Q16594 264 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 KIAA2026Q5HYC2 2103 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 PRAMEF5Q5TYX0 476 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 RNLSQ5VYX0 342 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 ZNF529Q6P280 563 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 THRSPQ92748 146 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 SELENOIQ9C0D9 397 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 PCDHB16Q9NRJ7 776 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 ZNF581Q9P0T4 197 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 FOXJ3Q9UPW0 622 aa8.28□□□□□ -1.08
HERC1-212ENST00000561348 MELTFP08582 738 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 FBP1P09467 338 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 GTF2F2P13984 249 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 FSTP19883 344 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 UBE2E1P51965 193 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 MEF2CQ06413 473 aaPredicted RBP8.27□□□□□ -1.09
HERC1-212ENST00000561348 ACSM1Q08AH1 577 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 GPR50Q13585 617 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 LY6EQ16553 131 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 Q6P435 159 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 Q6YL49 198 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 C1orf122Q6ZSJ8 110 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 C9orf139Q6ZV77 190 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 C3orf56Q8N813 242 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 SUMF2Q8NBJ7 301 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 CHST4Q8NCG5 386 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 OR4D6Q8NGJ1 314 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 OR13D1Q8NGV5 346 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 NDNFQ8TB73 568 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 FAM216AQ8WUB2 273 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 CCDC107Q8WV48 283 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 C17orf50Q8WW18 174 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 C1orf147Q96MC9 270 aaPredicted RBP8.27□□□□□ -1.09
HERC1-212ENST00000561348 BARHL1Q9BZE3 327 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 CHIAQ9BZP6 476 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 PPIL3Q9H2H8 161 aaKnown RBP8.27□□□□□ -1.09
HERC1-212ENST00000561348 RHOFQ9HBH0 211 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 PLGRKTQ9HBL7 147 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 KIF25Q9UIL4 384 aa8.27□□□□□ -1.09
HERC1-212ENST00000561348 AK6Q9Y3D8 172 aaKnown RBP8.27□□□□□ -1.09
HERC1-212ENST00000561348 TRAV24A0A0B4J272 114 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 ODAMA1E959 279 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 MEGF11A6BM72 1044 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 FAM181BA6NEQ2 426 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 ZNF780AO75290 641 aaPredicted RBP8.26□□□□□ -1.09
HERC1-212ENST00000561348 MPIG6BO95866 241 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 IGHV3-7P01780 117 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 CD1AP06126 327 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 IGHV1-8P0DP01 117 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 SRMP19623 302 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 CDK2P24941 298 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 CALRP27797 417 aaKnown RBP8.26□□□□□ -1.09
HERC1-212ENST00000561348 RBM11P57052 281 aaKnown RBP8.26□□□□□ -1.09
HERC1-212ENST00000561348 EMX1Q04741 257 aaPredicted RBP8.26□□□□□ -1.09
HERC1-212ENST00000561348 MLLT11Q13015 90 aaPredicted RBP8.26□□□□□ -1.09
HERC1-212ENST00000561348 GPR176Q14439 515 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 RBM39Q14498 530 aaKnown RBP8.26□□□□□ -1.09
HERC1-212ENST00000561348 FAM189A2Q15884 450 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 NKAPLQ5M9Q1 402 aa8.26□□□□□ -1.09
HERC1-212ENST00000561348 GLT8D1Q68CQ7 371 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms