RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 OR5H14A6NHG9 310 aa1.55□□□□□ -2.16
USP8-218ENST00000561330 TP53I11O14683 189 aa1.55□□□□□ -2.16
USP8-218ENST00000561330 SH2D1AO60880 128 aa1.55□□□□□ -2.16
USP8-218ENST00000561330 CEACAM16Q2WEN9 425 aa1.55□□□□□ -2.16
USP8-218ENST00000561330 ACTBL2Q562R1 376 aa1.55□□□□□ -2.16
USP8-218ENST00000561330 DNAAF3Q8N9W5 541 aa1.55□□□□□ -2.16
USP8-218ENST00000561330 CCL17Q92583 94 aa1.55□□□□□ -2.16
USP8-218ENST00000561330 KIAA1143Q96AT1 154 aaPredicted RBP1.55□□□□□ -2.16
USP8-218ENST00000561330 VAT1Q99536 393 aa1.55□□□□□ -2.16
USP8-218ENST00000561330 MFSD1Q9H3U5 465 aa1.55□□□□□ -2.16
USP8-218ENST00000561330 NRCAMQ92823 1304 aa1.55□□□□□ -2.16
USP8-218ENST00000561330 TVP23AA6NH52 213 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 KLRC4-KLRK1H3BQV0 150 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 GUSBP08236 651 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 PSKH1P11801 424 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 S100A2P29034 98 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 FOXF1Q12946 379 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 SPIN4Q56A73 249 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 HSP90AA4PQ58FG1 418 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 TPGS1Q6ZTW0 290 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 TCF23Q7RTU1 214 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 MARCH3Q86UD3 253 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 MFSD8Q8NHS3 518 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 RNASE11Q8TAA1 199 aaKnown RBP1.54□□□□□ -2.16
USP8-218ENST00000561330 CHID1Q9BWS9 393 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 POMKQ9H5K3 350 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 HSPE1-MOB4S4R3N1 261 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 V9GYY9 64 aa1.54□□□□□ -2.16
USP8-218ENST00000561330 IGHV1-45A0A0A0MS14 117 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 RBFOX3A6NFN3 312 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 POLR3AO14802 1390 aaPredicted RBP1.53□□□□□ -2.16
USP8-218ENST00000561330 S1PR2O95136 353 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 MBP02144 154 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 PRKACAP17612 351 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 M6PRP20645 277 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 PSMB9P28065 219 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 COILP38432 576 aaPredicted RBP1.53□□□□□ -2.16
USP8-218ENST00000561330 TMEM176BQ3YBM2 270 aaPredicted RBP1.53□□□□□ -2.16
USP8-218ENST00000561330 NXNL2Q5VZ03 156 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 LAIR2Q6ISS4 152 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 ASCL4Q6XD76 172 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 ZNF767PQ75MW2 155 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 FER1L6-AS1Q8NA97 138 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 OR5C1Q8NGR4 320 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 DOK4Q8TEW6 326 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 BLNKQ8WV28 456 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 CMBLQ96DG6 245 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 ADTRPQ96IZ2 230 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 LINC01587Q99440 93 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 TXNDC17Q9BRA2 123 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 UTP23Q9BRU9 249 aaKnown RBP1.53□□□□□ -2.16
USP8-218ENST00000561330 BEX2Q9BXY8 128 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 NXF2Q9GZY0 626 aaKnown RBP1.53□□□□□ -2.16
USP8-218ENST00000561330 FBXO44Q9H4M3 255 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 ACOT13Q9NPJ3 140 aa1.53□□□□□ -2.16
USP8-218ENST00000561330 FBN3Q75N90 2809 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 PGPA6NDG6 321 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 F5H5T6 163 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 GMDSO60547 372 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 MYO1DO94832 1006 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 WDR43Q15061 677 aaKnown RBP eCLIP1.52□□□□□ -2.17
USP8-218ENST00000561330 GOLGA7BQ2TAP0 167 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 ZCWPW2Q504Y3 356 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 NIPAL1Q6NVV3 410 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 SCXQ7RTU7 201 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 RBM45Q8IUH3 476 aaKnown RBP1.52□□□□□ -2.17
USP8-218ENST00000561330 CLHC1Q8NHS4 586 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 TOP1MTQ969P6 601 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 HIST1H2BAQ96A08 127 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 TSSK6Q9BXA6 273 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 SLC25A31Q9H0C2 315 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 ARL6Q9H0F7 186 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 DIABLOQ9NR28 239 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 DDX18Q9NVP1 670 aaKnown RBP1.52□□□□□ -2.17
USP8-218ENST00000561330 VPREB3Q9UKI3 123 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 ICE1Q9Y2F5 2266 aa1.52□□□□□ -2.17
USP8-218ENST00000561330 A0A1B0GTI1 187 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 GOLGA6L7A0A1B0GV03 622 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 A0A1B0GXF2 115 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 A0A1W2PPV4 95 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 C17orf98A8MV24 154 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 LY6LH3BQJ8 138 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 K7EN84 100 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 M0QXV9 152 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 PRMT5O14744 637 aaPredicted RBP1.51□□□□□ -2.17
USP8-218ENST00000561330 EEF1E1O43324 174 aaKnown RBP1.51□□□□□ -2.17
USP8-218ENST00000561330 GYPCP04921 128 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 OR12D1P0DN82 309 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 RAB25P57735 213 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 ACSBG2Q5FVE4 666 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 C10orf91Q5T1B1 145 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 C16orf87Q6PH81 154 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 NIT1Q86X76 327 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 TMEM25Q86YD3 366 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 DRAXINQ8NBI3 349 aaPredicted RBP1.51□□□□□ -2.17
USP8-218ENST00000561330 OR52K1Q8NGK4 314 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 CPB2Q96IY4 423 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 TTTY12Q9BZ98 90 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 NCOR1P1Q9H4R4 102 aa1.51□□□□□ -2.17
USP8-218ENST00000561330 SDHAF2Q9NX18 166 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms