RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 NPFFO15130 113 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 LMO1P25800 156 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 P2RX3P56373 397 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 GABARAPL2P60520 117 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 RPS25P62851 125 aaKnown RBP16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 ACTG1P63261 375 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 MEF2CQ06413 473 aaPredicted RBP16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 AESQ08117 197 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 TPBGQ13641 420 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 SLC22A6Q4U2R8 563 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 TRAPPC6BQ86SZ2 158 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 OSR2Q8N2R0 312 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 C11orf42Q8N5U0 333 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 NKAIN3Q8N8D7 197 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 OR51T1Q8NGJ9 327 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 TCF7L1Q9HCS4 588 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 IL36GQ9NZH8 169 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 ST3GAL6Q9Y274 331 aa16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 MRPS28Q9Y2Q9 187 aaKnown RBP16.29■□□□□ 0.2
TSPAN3-210ENST00000561277 A0A1W2PP11 408 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 ZNF728P0DKX0 622 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 COX7A1P24310 79 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 SAA4P35542 130 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 UBE2E1P51965 193 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 SLC9A3R2Q15599 337 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 HCP5Q6MZN7 132 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 UNQ9370/PRO34162Q6UXP9 181 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 ZNF367Q7RTV3 350 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 FAM216AQ8WUB2 273 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 ZNF714Q96N38 554 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 ACOT13Q9NPJ3 140 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 ZNF581Q9P0T4 197 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 FAM96BQ9Y3D0 163 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 LINC00312Q9Y6C7 94 aa16.28■□□□□ 0.2
TSPAN3-210ENST00000561277 MEIOCA2RUB1 952 aa16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 CPEP16870 476 aa16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 GP2P55259 537 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 DLX6P56179 175 aa16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 RBM11P57052 281 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 IL13RA2Q14627 380 aa16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 HSD17B12Q53GQ0 312 aa16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 PAN3Q58A45 887 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 AWAT2Q6E213 333 aa16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 GLIPR1L1Q6UWM5 242 aa16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 Q8NFD4 153 aa16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 SPATA3Q8NHX4 192 aa16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 SLC25A28Q96A46 364 aa16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 SF3B6Q9Y3B4 125 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 DSCAML1Q8TD84 2053 aa16.27■□□□□ 0.2
TSPAN3-210ENST00000561277 C17orf98A8MV24 154 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 ZNF780AO75290 641 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 SC5DO75845 299 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 MELTFP08582 738 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 ERP29P30040 261 aaKnown RBP16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 GLIPR1P48060 266 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 KRBOX4Q5JUW0 171 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 Q6YL49 198 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 OR4D6Q8NGJ1 314 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 PPIL3Q9H2H8 161 aaKnown RBP16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 PRDM13Q9H4Q3 707 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 HEXA-AS1Q9H8Q6 139 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 TRAV24A0A0B4J272 114 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 FUOMA2VDF0 154 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 OR7C1O76099 320 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 CSN2P05814 226 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 EMX1Q04741 257 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 CDH26Q8IXH8 852 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 COQ2Q96H96 371 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 ZMAT3Q9HA38 289 aaKnown RBP16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 PCDHB16Q9NRJ7 776 aa16.26■□□□□ 0.19
TSPAN3-210ENST00000561277 TRGV10A0A0A0MS01 117 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 GEMIN2O14893 280 aaKnown RBP16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 PAHP00439 452 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 FBP1P09467 338 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 IGHV1-8P0DP01 117 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 GTF2F2P13984 249 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 SRMP19623 302 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 GPR176Q14439 515 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 TRAM1Q15629 374 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 NHLRC3Q5JS37 347 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 TMEM91Q6ZNR0 172 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 LRRTM1Q86UE6 522 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 LYPD6Q86Y78 171 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 SVOPQ8N4V2 548 aa16.25■□□□□ 0.19
TSPAN3-210ENST00000561277 STAB1Q9NY15 2570 aa16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 MEGF11A6BM72 1044 aa16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 CLDN34H7C241 214 aa16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 RNASE1P07998 156 aaKnown RBP16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 UCHL1P09936 223 aa16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 PSMA1P25786 263 aaKnown RBP16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 GABRA5P31644 462 aa16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 FABP5Q01469 135 aa16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 PHYHIPQ92561 330 aa16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 UQCC2Q9BRT2 126 aa16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 SLITRK2Q9H156 845 aa16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 BANF2Q9H503 90 aa16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 UBE2J1Q9Y385 318 aaPredicted RBP16.24■□□□□ 0.19
TSPAN3-210ENST00000561277 ODAMA1E959 279 aa16.23■□□□□ 0.19
TSPAN3-210ENST00000561277 MRPS14O60783 128 aaKnown RBP16.23■□□□□ 0.19
TSPAN3-210ENST00000561277 CLPXO76031 633 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms