RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ZNF44P15621 663 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 CELP19835 753 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 LMO1P25800 156 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 ZNF93P35789 620 aaPredicted RBP12.95□□□□□ -0.34
LMX1B-204ENST00000561065 RANBP1P43487 201 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 SCN1BQ07699 218 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 RIPK1Q13546 671 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 LDLRAD2Q5SZI1 272 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 ELP2Q6IA86 826 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 ASPHD2Q6ICH7 369 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 OR52W1Q6IF63 320 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 CRIP3Q6Q6R5 217 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 LHFPL4Q7Z7J7 247 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 CDH26Q8IXH8 852 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 DYNAPQ8N1N2 210 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 OR5D18Q8NGL1 313 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 TNFAIP8L1Q8WVP5 186 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 ZNF714Q96N38 554 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 SPACA5Q96QH8 159 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 SSX3Q99909 188 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 METTL9Q9H1A3 318 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 PPA2Q9H2U2 334 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 BLOC1S6Q9UL45 172 aa12.95□□□□□ -0.34
LMX1B-204ENST00000561065 TRGV10A0A0A0MS01 117 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 C21orf33P30042 268 aaPredicted RBP12.94□□□□□ -0.34
LMX1B-204ENST00000561065 PTGFRP43088 359 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 AQP4P55087 323 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 GPR50Q13585 617 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 LY6EQ16553 131 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 LRRC75BQ2VPJ9 315 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 ZNF529Q6P280 563 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 TRAPPC6BQ86SZ2 158 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 ZNF565Q8N9K5 539 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 OR52N4Q8NGI2 321 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 CDCA4Q9BXL8 241 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 BARHL1Q9BZE3 327 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 FAM192AQ9GZU8 254 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 MEGF9Q9H1U4 602 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 GAL3ST2Q9H3Q3 398 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 TAS2R4Q9NYW5 299 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 ING4Q9UNL4 249 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 FOXJ3Q9UPW0 622 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 UBE2J1Q9Y385 318 aaPredicted RBP12.94□□□□□ -0.34
LMX1B-204ENST00000561065 LINC00312Q9Y6C7 94 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 NOTCH1P46531 2555 aa12.94□□□□□ -0.34
LMX1B-204ENST00000561065 IGKV1-12A0A0C4DH73 117 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 ODF3BA8MYP8 253 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 CHST1O43916 411 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 PSPNO60542 156 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 IGKV1D-12P01611 117 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 CALCBP10092 127 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 MYF6P23409 242 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 DUSP1P28562 367 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 TGFBR2P37173 567 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 KCNJ3P48549 501 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 EDDM3AQ14507 147 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 DDI2Q5TDH0 399 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 XAF1Q6GPH4 301 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 TPRX1Q8N7U7 411 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 PIFOQ8TCI5 191 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 ANKRD60Q9BZ19 345 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 CHST6Q9GZX3 395 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 Q9H521 79 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 FKBP14Q9NWM8 211 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 SIGLEC9Q9Y336 463 aa12.93□□□□□ -0.34
LMX1B-204ENST00000561065 TRBV5-5A0A0J9YX44 114 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 FAM90A8PA6NJQ4 464 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 SIRPB1O00241 398 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 HTR3BO95264 441 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 TSPAN15O95858 294 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 OR2H2O95918 312 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 CSN2P05814 226 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 SNU13P55769 128 aaKnown RBP12.92□□□□□ -0.34
LMX1B-204ENST00000561065 P2RX3P56373 397 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 DOC2BQ14184 412 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 IL13RA2Q14627 380 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 SPHARQ15513 63 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 AANATQ16613 207 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 HIST2H2BDQ6DRA6 164 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 SLC35E4Q6ICL7 350 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 TET2Q6N021 2002 aaPredicted RBP12.92□□□□□ -0.34
LMX1B-204ENST00000561065 ASCL4Q6XD76 172 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 LINC00596Q86U02 117 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 ZNF485Q8NCK3 441 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 NRG4Q8WWG1 115 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 NR1H4Q96RI1 486 aaPredicted RBP12.92□□□□□ -0.34
LMX1B-204ENST00000561065 OR6C3Q9NZP0 311 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 RAB26Q9ULW5 256 aa12.92□□□□□ -0.34
LMX1B-204ENST00000561065 A0A0G2JK05 382 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 ZP1P60852 638 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 MED22Q15528 200 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 TRAM1Q15629 374 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 PLA1AQ53H76 456 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 ZNF626Q68DY1 528 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 IZUMO2Q6UXV1 221 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 OR4S1Q8NGB4 309 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 OR51A2Q8NGJ7 313 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 OR51T1Q8NGJ9 327 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 RGP1Q92546 391 aaPredicted RBP12.91□□□□□ -0.34
LMX1B-204ENST00000561065 FOXRED1Q96CU9 486 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms