RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PALMDQ9NP74 551 aa14.55□□□□□ -0.08
TPM1-226ENST00000560959 EXOSC4Q9NPD3 245 aaKnown RBP14.55□□□□□ -0.08
TPM1-226ENST00000560959 MRM2Q9UI43 246 aaKnown RBP14.55□□□□□ -0.08
TPM1-226ENST00000560959 ODAMA1E959 279 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 CCRL2O00421 344 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 RPLP1P05386 114 aaKnown RBP14.54□□□□□ -0.08
TPM1-226ENST00000560959 ELANEP08246 267 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 ANXA8P13928 327 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 PRKACAP17612 351 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 BCL3P20749 454 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 RAB7AP51149 207 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 FOXE3Q13461 319 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 HES1Q14469 280 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 C17orf58Q2M2W7 97 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 PP6455Q8WZ26 134 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 RHOFQ9HBH0 211 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 KRT84Q9NSB2 600 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 OR6C3Q9NZP0 311 aa14.54□□□□□ -0.08
TPM1-226ENST00000560959 KBTBD11-OT1A0A1B0GTJ5 212 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 A0A1W2PPI3 338 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 ZNF670-ZNF695F2Z2N8 137 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 J3QR06 171 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 SIRPB1O00241 398 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 CGB3P0DN86 165 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 CGB7P0DN87 165 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 FHL3Q13643 280 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 EBI3Q14213 229 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 TRIM25Q14258 630 aaKnown RBP14.53□□□□□ -0.08
TPM1-226ENST00000560959 TMEM236Q5W0B7 351 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 MEPCEQ7L2J0 689 aaKnown RBP14.53□□□□□ -0.08
TPM1-226ENST00000560959 TMEM179BQ7Z7N9 219 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 CATSPERDQ86XM0 798 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 CHST4Q8NCG5 386 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 KIRREL1Q96J84 757 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 COMMD4Q9H0A8 199 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 CLN6Q9NWW5 311 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 TVP23BQ9NYZ1 205 aa14.53□□□□□ -0.08
TPM1-226ENST00000560959 MAGEB4O15481 346 aaPredicted RBP14.52□□□□□ -0.09
TPM1-226ENST00000560959 PDZK1IP1Q13113 114 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 MADCAM1Q13477 382 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 GPR50Q13585 617 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 DEFB136Q30KP8 78 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 ZNF260Q3ZCT1 412 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 KRBOX4Q5JUW0 171 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 PLEKHG7Q6ZR37 379 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 SLC16A12Q6ZSM3 486 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 TGIF2LXQ8IUE1 241 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 SLC35F2Q8IXU6 374 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 HAVCR2Q8TDQ0 301 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 CITED4Q96RK1 184 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 ADI1Q9BV57 179 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 ABCG5Q9H222 651 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 NCOR1P1Q9H4R4 102 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 ZMAT4Q9H898 229 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 LINC00574Q9H8X3 128 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 GSTK1Q9Y2Q3 226 aa14.52□□□□□ -0.09
TPM1-226ENST00000560959 LINC01548A6NM66 108 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 SNX3O60493 162 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 HOXB6P17509 224 aaKnown RBP14.51□□□□□ -0.09
TPM1-226ENST00000560959 PRKACBP22694 351 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 MTCP1P56278 107 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 UTF1Q5T230 341 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 ZNF565Q8N9K5 539 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 C4orf3Q8WVX3 66 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 COQ2Q96H96 371 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 ADGRL4Q9HBW9 690 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 LIN7CQ9NUP9 197 aaKnown RBP14.51□□□□□ -0.09
TPM1-226ENST00000560959 ARL8BQ9NVJ2 186 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 NKX1-2Q9UD57 310 aaPredicted RBP14.51□□□□□ -0.09
TPM1-226ENST00000560959 KIAA2026Q5HYC2 2103 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 CSMD3Q7Z407 3707 aa14.51□□□□□ -0.09
TPM1-226ENST00000560959 GNGT2O14610 69 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 KDM4BO94953 1096 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 IGKV1D-33P01593 117 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 IGKV1-33P01594 117 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 KRT8P05787 483 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 NFYBP25208 207 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 GPR12P47775 334 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 POU3F4P49335 361 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 MS4A2Q01362 244 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 HNF4GQ14541 408 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 LHFPL2Q6ZUX7 228 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 UTS2BQ765I0 119 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 DNAJC9Q8WXX5 260 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 GAR1Q9NY12 217 aaKnown RBP14.5□□□□□ -0.09
TPM1-226ENST00000560959 H2AFY2Q9P0M6 372 aaPredicted RBP14.5□□□□□ -0.09
TPM1-226ENST00000560959 PSG11Q9UQ72 335 aa14.5□□□□□ -0.09
TPM1-226ENST00000560959 IGKV1-9A0A0C4DH69 117 aa14.49□□□□□ -0.09
TPM1-226ENST00000560959 MPZL2O60487 215 aa14.49□□□□□ -0.09
TPM1-226ENST00000560959 RPP14O95059 124 aaKnown RBP14.49□□□□□ -0.09
TPM1-226ENST00000560959 IGHG4P01861 327 aa14.49□□□□□ -0.09
TPM1-226ENST00000560959 CALCBP10092 127 aa14.49□□□□□ -0.09
TPM1-226ENST00000560959 CRISP1P54107 249 aa14.49□□□□□ -0.09
TPM1-226ENST00000560959 SNU13P55769 128 aaKnown RBP14.49□□□□□ -0.09
TPM1-226ENST00000560959 ODF4Q2M2E3 257 aa14.49□□□□□ -0.09
TPM1-226ENST00000560959 FAM27D1Q5T7N8 215 aa14.49□□□□□ -0.09
TPM1-226ENST00000560959 NXNL2Q5VZ03 156 aa14.49□□□□□ -0.09
TPM1-226ENST00000560959 Q6P435 159 aa14.49□□□□□ -0.09
TPM1-226ENST00000560959 YIPF7Q8N8F6 280 aa14.49□□□□□ -0.09
TPM1-226ENST00000560959 SPSB1Q96BD6 273 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms