RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 CCL17Q92583 94 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 DYRK2Q92630 601 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 MAP1LC3CQ9BXW4 147 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 ESRP2Q9H6T0 727 aaKnown RBP11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 LINC00862A6NCI5 91 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR4C45A6NMZ5 311 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 K7ESF4 209 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 MFNGO00587 321 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 CRYBA1P05813 215 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 MELTFP08582 738 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 LYZP61626 148 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 LHX8Q68G74 356 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR5AU1Q8NGC0 362 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 COX14Q96I36 57 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 SLC26A1Q9H2B4 701 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 PPIHO43447 177 aaKnown RBP11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 METAP1P53582 386 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 GAMTQ14353 236 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 FAM109BQ6ICB4 259 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 PRSS41Q7RTY9 318 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 ATG4DQ86TL0 474 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR4D9Q8NGE8 314 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 LILRB1Q8NHL6 650 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 PACRGQ96M98 296 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 LINC00052Q96N35 136 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 PARP11Q9NR21 331 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 V9GYH0 126 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 APC2O95996 2303 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 DNASE2O00115 360 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 ZNF207O43670 478 aaKnown RBP11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 PPYP01298 95 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 P01737 135 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 ARG1P05089 322 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 YBX1P67809 324 aaKnown RBP11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 IGSF11Q5DX21 431 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 ZNF343Q6P1L6 599 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 GUSBP11Q6P575 273 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 SLC16A13Q7RTY0 426 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 ZNF547Q8IVP9 402 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 C9orf62Q8N4C0 152 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 TMEM251Q8N6I4 163 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 DOK5Q9P104 306 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 PRNDQ9UKY0 176 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 IGHV3-43A0A0B4J1X8 118 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 A6NDN8 102 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 CORTO00230 105 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 IGHV3-43DP0DP04 118 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 AREGP15514 252 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 ABLIM2Q6H8Q1 611 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 SCGB1D4Q6XE38 83 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 Q6ZS52 159 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR2M3Q8NG83 312 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 NTMQ9P121 344 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 WNT16Q9UBV4 365 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 PITPNC1Q9UKF7 332 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 LEUTXA8MZ59 168 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 NPIPB8E9PQR5 432 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 ACAA2P42765 397 aaKnown RBP11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 PSMB2P49721 201 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 LHFPL5Q8TAF8 219 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 FAM117AQ9C073 453 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 RAB1BQ9H0U4 201 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 ALX4Q9H161 411 aaPredicted RBP11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 AMDHD2Q9Y303 409 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 A0A1B0GU03 582 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 ACP1P24666 158 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 COL8A1P27658 744 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR10J1P30954 320 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 ZNF683Q8IZ20 524 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 LPAR5Q9H1C0 372 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 FRRS1LQ9P0K9 344 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 SERGEFQ9UGK8 458 aa11.65□□□□□ -0.54
CSPG4P11-201ENST00000560634 KLK10O43240 276 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 MYF5P13349 255 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 LGALS7P47929 136 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 PSG5Q15238 335 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 ICE1Q9Y2F5 2266 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 LIPT2A6NK58 231 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 SMPD2O60906 423 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 MPZL1O95297 269 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 ACTL6AO96019 429 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 FAM219AQ8IW50 185 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 MED19A0JLT2 244 aaPredicted RBP11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 C5orf52A6NGY3 159 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 J3QT63 122 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 SOCS1O15524 211 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 CT62P0C5K7 136 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 DLK1P80370 383 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 TNXAQ16473 311 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 STARD4Q96DR4 205 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 TTC3P53804 2025 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 CTXND1A0A1B0GTU2 59 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 GNG7O60262 68 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 COX7A1P24310 79 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 MMP16P51512 607 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 ZNF345Q14585 488 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 MESTQ5EB52 335 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 BHLHA9Q7RTU4 235 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 VSTM2LQ96N03 204 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 GABRG3Q99928 467 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms