RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 BEND2Q8NDZ0 799 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 NFAM1Q8NET5 270 aaPredicted RBP7.47□□□□□ -1.21
CCDC33-209ENST00000560565 SEMA6DQ8NFY4 1073 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 SLAMF9Q96A28 289 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 MUCL1Q96DR8 90 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 LURAP1Q96LR2 239 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 ADOQ96SZ5 270 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 C2orf88Q9BSF0 95 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 NICN1Q9BSH3 213 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 WWTR1Q9GZV5 400 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 METTL9Q9H1A3 318 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 KCNK15Q9H427 330 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 PLEKHF2Q9H8W4 249 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 GPR84Q9NQS5 396 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 VDAC3Q9Y277 283 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 AMDHD2Q9Y303 409 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 LSM5Q9Y4Y9 91 aaKnown RBP7.47□□□□□ -1.21
CCDC33-209ENST00000560565 KIAA1549Q9HCM3 1950 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 MKRN2OSH3BPM6 223 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 CLDN34H7C241 214 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 SLC31A2O15432 143 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 TSPAN2O60636 221 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 ZFAND5O76080 213 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 KNG1P01042 644 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 GCGP01275 180 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 FAM87AP0C7U9 286 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 BLVRBP30043 206 aaPredicted RBP7.46□□□□□ -1.22
CCDC33-209ENST00000560565 DDTP30046 118 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 CEACAM6P40199 344 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 GLIPR1P48060 266 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 OR2B8PP59922 312 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 HERV-K104P61576 105 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 RPS23P62266 143 aaKnown RBP7.46□□□□□ -1.22
CCDC33-209ENST00000560565 LSM6P62312 80 aaKnown RBP7.46□□□□□ -1.22
CCDC33-209ENST00000560565 RNF4P78317 190 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 SRSF7Q16629 238 aaKnown RBP eCLIP7.46□□□□□ -1.22
CCDC33-209ENST00000560565 DEFB109BQ30KR1 87 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF506Q5JVG8 444 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 ACER2Q5QJU3 275 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 CBLN3Q6UW01 205 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 LANCL3Q6ZV70 420 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 PRSS58Q8IYP2 241 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 GATSQ8NAP1 163 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 APCDD1LQ8NCL9 501 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 OR51F2Q8NH61 342 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 RNASEH2CQ8TDP1 164 aaKnown RBP7.46□□□□□ -1.22
CCDC33-209ENST00000560565 GPR119Q8TDV5 335 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 DOK4Q8TEW6 326 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 IL22RA2Q969J5 263 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 ACY3Q96HD9 319 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 MRGPRX4Q96LA9 322 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 WDR77Q9BQA1 342 aaPredicted RBP7.46□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF2Q9BSG1 426 aaPredicted RBP7.46□□□□□ -1.22
CCDC33-209ENST00000560565 ST6GALNAC5Q9BVH7 336 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 PECRQ9BY49 303 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 BCL2L14Q9BZR8 327 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF700Q9H0M5 742 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 NXF5Q9H1B4 397 aaKnown RBP7.46□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF286AQ9HBT8 521 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 PLEKHJ1Q9NW61 149 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 KLHL13Q9P2N7 655 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 ANXA10Q9UJ72 324 aa7.46□□□□□ -1.22
CCDC33-209ENST00000560565 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 LOC102725191A0A1B0GVB3 256 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 hCG_1809904A0A1W2PP81 198 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 A0A1W2PR64 198 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 A0A1W2PRV1 198 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 CDC14CA4D256 554 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF732B4DXR9 585 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 PPP5D1E7EU14 171 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 H3BQ15 152 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 K7N7A8 449 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 M0QZK8 103 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 ETV2O00321 342 aaPredicted RBP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 NME2P1O60361 137 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 GGCTO75223 188 aaKnown RBP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 KLF7O75840 302 aaPredicted RBP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 DHRS3O75911 302 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 DIRAS3O95661 229 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 SCGB1D2O95969 90 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 IFNA5P01569 189 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 CRYABP02511 175 aaKnown RBP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 CTXN2P0C2S0 81 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 GABRR1P24046 479 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 LMO1P25800 156 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 CCKARP32238 428 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 RPS27P42677 84 aaKnown RBP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF41P51814 821 aaPredicted RBP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 NDUFA6P56556 154 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 SPCS3P61009 180 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 RPS18P62269 152 aaKnown RBP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 HLA-DRB3P79483 266 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 PMS2P11Q13670 270 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 SSPNQ14714 243 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 NNATQ16517 81 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 PLAC9Q5JTB6 97 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 ATP1A1-AS1Q5TC04 95 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 LCN10Q6JVE6 187 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF429Q86V71 674 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 TGIF2LYQ8IUE0 185 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms