RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CYTL1Q9NRR1 136 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 PRSS50Q9UI38 385 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 POLDIP2Q9Y2S7 368 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 NSG2Q9Y328 171 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 ATP23Q9Y6H3 246 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 FREM1Q5H8C1 2179 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 ZNF503-AS2A6NEH8 195 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 ZNF891A8MT65 544 aaPredicted RBP8.31□□□□□ -1.08
RTF1-206ENST00000560447 TRDCB7Z8K6 153 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 NPIPB11E5RHQ5 1161 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 BET1O15155 118 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 CEACAM4O75871 244 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 JTBO76095 146 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 PPYP01298 95 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 HOXB5P09067 269 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 RAC2P15153 192 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 ZNF250P15622 560 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 ZNF14P17017 642 aaPredicted RBP8.31□□□□□ -1.08
RTF1-206ENST00000560447 BCL3P20749 454 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 CCNOP22674 350 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 IL32P24001 234 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 DUSP1P28562 367 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 S100GP29377 79 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 WNT5AP41221 380 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 GPM6AP51674 278 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 FOXG1P55316 489 aaPredicted RBP8.31□□□□□ -1.08
RTF1-206ENST00000560447 UBE2NP61088 152 aaKnown RBP8.31□□□□□ -1.08
RTF1-206ENST00000560447 ATXN7L3Q14CW9 347 aaPredicted RBP8.31□□□□□ -1.08
RTF1-206ENST00000560447 DAZAP2Q15038 168 aaPredicted RBP8.31□□□□□ -1.08
RTF1-206ENST00000560447 RSPO4Q2I0M5 234 aaPredicted RBP8.31□□□□□ -1.08
RTF1-206ENST00000560447 EIF2S3LQ2VIR3 472 aaKnown RBP8.31□□□□□ -1.08
RTF1-206ENST00000560447 FAM76BQ5HYJ3 339 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 DMRTC1Q5HYR2 192 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 GGNBP1Q5YKI7 109 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 Q6ZT83 130 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 MDP1Q86V88 176 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 LDLRAD3Q86YD5 345 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 C17orf78Q8N4C9 275 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 OR4A4PQ8NGN8 299 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 ARL11Q969Q4 196 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 C18orf12Q96KH6 178 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 PRRX2Q99811 253 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 SLC5A7Q9GZV3 580 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 CDH20Q9HBT6 801 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 MTCH1Q9NZJ7 389 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 PCDHB10Q9UN67 800 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 PTPRBP23467 1997 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 AHCTF1Q8WYP5 2266 aa8.31□□□□□ -1.08
RTF1-206ENST00000560447 IQCF6A8MYZ5 107 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 AHRRA9YTQ3 701 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 GPR31O00270 319 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 DEGS1O15121 323 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 NGFP01138 241 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 MMP9P14780 707 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 CBR1P16152 277 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 COX5AP20674 150 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 NPBWR2P48146 333 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 KCNJ3P48549 501 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 BLOC1S1P78537 153 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 ZNF169Q14929 603 aaPredicted RBP8.3□□□□□ -1.08
RTF1-206ENST00000560447 C9orf135Q5VTT2 229 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 IL34Q6ZMJ4 242 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 FAM214BQ7L5A3 538 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 FAM58AQ8N1B3 248 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 FAM169BQ8N8A8 192 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 PCNPQ8WW12 178 aaKnown RBP8.3□□□□□ -1.08
RTF1-206ENST00000560447 TOMM40LQ969M1 308 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 MARC2Q969Z3 335 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 SLAMF9Q96A28 289 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 MSI2Q96DH6 328 aaKnown RBP8.3□□□□□ -1.08
RTF1-206ENST00000560447 RRNAD1Q96FB5 475 aaKnown RBP8.3□□□□□ -1.08
RTF1-206ENST00000560447 MARS2Q96GW9 593 aaKnown RBP8.3□□□□□ -1.08
RTF1-206ENST00000560447 TMEM56Q96MV1 263 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 CABLES2Q9BTV7 478 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 FGF23Q9GZV9 251 aaPredicted RBP8.3□□□□□ -1.08
RTF1-206ENST00000560447 OR51I2Q9H344 312 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 LIME1Q9H400 295 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 OR5AC2Q9NZP5 309 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 POMT1Q9Y6A1 747 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 TMEM56-RWDD3S4R434 201 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 VCANP13611 3396 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 MED12LQ86YW9 2145 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 DNAJC13O75165 2243 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 RTTNQ86VV8 2226 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 ZNF407Q9C0G0 2248 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 NCOR1O75376 2440 aa8.3□□□□□ -1.08
RTF1-206ENST00000560447 KNTC1P50748 2209 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 CLEC18AA5D8T8 446 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 PRR33A8MZF0 331 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 K7EPK0 472 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 MPPED1O15442 326 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 ST8SIA3O43173 380 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 SMPD2O60906 423 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 OR5AC1P0C628 307 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 HKR1P10072 659 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 AADACP22760 399 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 RPL12P30050 165 aaKnown RBP8.29□□□□□ -1.08
RTF1-206ENST00000560447 P2RY1P47900 373 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 S100A10P60903 97 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 PPP1CBP62140 327 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms