RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 USB1Q9BQ65 265 aaKnown RBP9.2□□□□□ -0.94
SNRPA1-211ENST00000560433 NRIP2Q9BQI9 281 aa9.2□□□□□ -0.94
SNRPA1-211ENST00000560433 DPCDQ9BVM2 203 aaPredicted RBP9.2□□□□□ -0.94
SNRPA1-211ENST00000560433 CXXC4Q9H2H0 198 aa9.2□□□□□ -0.94
SNRPA1-211ENST00000560433 GPN1Q9HCN4 374 aaPredicted RBP9.2□□□□□ -0.94
SNRPA1-211ENST00000560433 ZFYVE26Q68DK2 2539 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 BET1O15155 118 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 IL5P05113 134 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 ZNF250P15622 560 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 H2BFSP57053 126 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 TAS2R46P59540 309 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 ERVK11-1P61568 191 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 Q6P435 159 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 TMEM108Q6UXF1 575 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 NLRC3Q7RTR2 1065 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 TCTE3Q8IZS6 198 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 PRR7Q8TB68 274 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 ZNF436Q9C0F3 470 aaPredicted RBP9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 METRNQ9UJH8 293 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 POLDIP2Q9Y2S7 368 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 SPEF1Q9Y4P9 236 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 SVEP1Q4LDE5 3571 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 PLSCR5A0PG75 271 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 PSPNO60542 156 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 PTBP3O95758 552 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 ANXA3P12429 323 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 SEC61A1P61619 476 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 IL13RA1P78552 427 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 ADORA2A-AS1P86434 159 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 SLC9A3R2Q15599 337 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 C11orf88Q6PI97 169 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 KCTD9Q7L273 389 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 ARRDC1Q8N5I2 433 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 TPRX1Q8N7U7 411 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 PLPPR1Q8TBJ4 325 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 ZNF431Q8TF32 576 aaPredicted RBP9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 TMEM230Q96A57 120 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 ZNF486Q96H40 463 aaPredicted RBP9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 POM121Q96HA1 1249 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 RTBDNQ9BSG5 229 aaPredicted RBP9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 DLL4Q9NR61 685 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 RCC2Q9P258 522 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 GPR132Q9UNW8 380 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 NOP16Q9Y3C1 178 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 ATP23Q9Y6H3 246 aa9.19□□□□□ -0.94
SNRPA1-211ENST00000560433 IGHV3OR15-7A0A075B7D8 119 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 MEIKINA0A087WXM9 373 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 SLC33A1O00400 549 aaPredicted RBP9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 NOS1APO75052 506 aaPredicted RBP9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 SLC22A5O76082 557 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 IGHV3-13P01766 116 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 PGAM2P15259 253 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 EGR1P18146 543 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 TBPP20226 339 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 FCGR2CP31995 323 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 UQCRFS1P47985 274 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 MPV17LQ2QL34 196 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 PAN3Q58A45 887 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 NHLRC3Q5JS37 347 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 TMEM211Q6ICI0 200 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 SLC25A42Q86VD7 318 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 MOGAT3Q86VF5 341 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 LHFPL1Q86WI0 220 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM219AQ8IW50 185 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 OR2AK2Q8NG84 335 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 OR2T35Q8NGX2 323 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 LRRC29Q8WV35 223 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 ITLN1Q8WWA0 313 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 GPHA2Q96T91 129 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 SLC23A1Q9UHI7 598 aa9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 ANKHD1Q8IWZ3 2542 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-211ENST00000560433 RFPL4AA6NLU0 287 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 SNRPGP15A8MWD9 76 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 RFPL4AL1F8VTS6 287 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 CA11O75493 328 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 DTYMKP23919 212 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 ACTBL2Q562R1 376 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 KDF1Q8NAX2 398 aaPredicted RBP9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 ZNF286AQ9HBT8 521 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 NECAP2Q9NVZ3 263 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 C9orf170A2RU37 121 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 TMEM210A6NLX4 147 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 FAM25EA8MYX2 175 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 HAND1O96004 215 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 NAPSAO96009 420 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 PLAUP00749 431 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 OR4A8P0C604 315 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 ZBTB25P24278 435 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 PMELP40967 661 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 ZNF81P51508 661 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 CCL8P80075 99 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 HERPUD1Q15011 391 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 ZNF660Q6AZW8 331 aaPredicted RBP9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 C12orf45Q8N5I9 185 aaPredicted RBP9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 ZDHHC22Q8N966 263 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 MRPL30Q8TCC3 161 aaKnown RBP9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 IL1F10Q8WWZ1 152 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 PLPPR2Q96GM1 343 aa9.17□□□□□ -0.94
SNRPA1-211ENST00000560433 MED30Q96HR3 178 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms