RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 RCN1Q15293 331 aa10.02□□□□□ -0.81
RABGGTA-213ENST00000560127 HLA-DRB5Q30154 266 aa10.02□□□□□ -0.81
RABGGTA-213ENST00000560127 LCN1P1Q5VSP4 162 aa10.02□□□□□ -0.81
RABGGTA-213ENST00000560127 TEX38Q6PEX7 206 aa10.02□□□□□ -0.81
RABGGTA-213ENST00000560127 COMMD2Q86X83 199 aa10.02□□□□□ -0.81
RABGGTA-213ENST00000560127 THNSL2Q86YJ6 484 aa10.02□□□□□ -0.81
RABGGTA-213ENST00000560127 ZNF454Q8N9F8 522 aa10.02□□□□□ -0.81
RABGGTA-213ENST00000560127 TM2D3Q9BRN9 247 aa10.02□□□□□ -0.81
RABGGTA-213ENST00000560127 YIPF3Q9GZM5 350 aa10.02□□□□□ -0.81
RABGGTA-213ENST00000560127 ZNF286AQ9HBT8 521 aa10.02□□□□□ -0.81
RABGGTA-213ENST00000560127 UBE2J1Q9Y385 318 aaPredicted RBP10.02□□□□□ -0.81
RABGGTA-213ENST00000560127 ACOD1A6NK06 481 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 PSPNO60542 156 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 CDK2P24941 298 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 CD34P28906 385 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 HTR1FP30939 366 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 CEACAM3P40198 252 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 MNDAP41218 407 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 VEGFCP49767 419 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 ROM1Q03395 351 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 MFGE8Q08431 387 aaPredicted RBP10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 IL24Q13007 206 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 GRK1Q15835 563 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 CLVS2Q5SYC1 327 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 UTF1Q5T230 341 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 LPCAT4Q643R3 524 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 OR52W1Q6IF63 320 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 CCDC144NLQ6NUI1 221 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 HEPN1Q6WQI6 88 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 SLC35E3Q7Z769 313 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 TRAPPC6BQ86SZ2 158 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 DRAM1Q8N682 238 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 CREB3L1Q96BA8 519 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 CNN2Q99439 309 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 C9orf16Q9BUW7 83 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 PRRG3Q9BZD7 231 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 PKIBQ9C010 78 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 PBOV1Q9GZY1 135 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 MTCH1Q9NZJ7 389 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 ENOPH1Q9UHY7 261 aa10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 SIRT4Q9Y6E7 314 aaPredicted RBP10.01□□□□□ -0.81
RABGGTA-213ENST00000560127 TMEM269A0A1B0GVZ9 245 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 OOSP1A8MZH6 123 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 J3QRE1 110 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 CCRL2O00421 344 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 FGF16O43320 207 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 ENTPD6O75354 484 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 DHRS3O75911 302 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 JTBO76095 146 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 BAG2O95816 211 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 HAND1O96004 215 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 INSL3P51460 131 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 PNLIPRP3Q17RR3 467 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 CXorf66Q5JRM2 361 aaPredicted RBP10□□□□□ -0.81
RABGGTA-213ENST00000560127 FOXRED2Q8IWF2 684 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 SLC35F2Q8IXU6 374 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 ENTHD1Q8IYW4 607 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 RNF152Q8N8N0 203 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 OR8J1Q8NGP2 316 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 OR56B4Q8NH76 319 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 TRMT10AQ8TBZ6 339 aaKnown RBP10□□□□□ -0.81
RABGGTA-213ENST00000560127 APH1BQ8WW43 257 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 IL36RNQ9UBH0 155 aa10□□□□□ -0.81
RABGGTA-213ENST00000560127 MRM2Q9UI43 246 aaKnown RBP10□□□□□ -0.81
RABGGTA-213ENST00000560127 ERICH4A6NGS2 130 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 A6NIN4 97 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 TOR1AO14656 332 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 MGST3O14880 152 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 CASQ2O14958 399 aaPredicted RBP9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 GABRR1P24046 479 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 P2RX3P56373 397 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 SNRPGP62308 76 aaKnown RBP9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 GPR50Q13585 617 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 RBM39Q14498 530 aaKnown RBP9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 SLC25A30Q5SVS4 291 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 FAM27D1Q5T7N8 215 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 PLEKHG7Q6ZR37 379 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 GID4Q8IVV7 300 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 SLAMF9Q96A28 289 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 RNFT2Q96EX2 444 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 CEP19Q96LK0 163 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 APOL4Q9BPW4 351 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 TEX12Q9BXU0 123 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 GAL3ST2Q9H3Q3 398 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 FAM118AQ9NWS6 357 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 CLN6Q9NWW5 311 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 WARS2Q9UGM6 360 aaKnown RBP9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 LAMP5Q9UJQ1 280 aa9.99□□□□□ -0.81
RABGGTA-213ENST00000560127 A0A1W2PQL4 384 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 TRIM64CA6NLI5 447 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 SLC16A6O15403 523 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 WBP4O75554 376 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 INMTO95050 263 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 TTRP02766 147 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 TMEM11P17152 192 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 ERP29P30040 261 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 OR3A1P47881 315 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 PRRX1P54821 245 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 CDC42P60953 191 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms