RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 CMTM4Q8IZR5 234 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 FAM185AQ8N0U4 392 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 C11orf42Q8N5U0 333 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 PPP1R35Q8TAP8 253 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 MRPS24Q96EL2 167 aaKnown RBP13.82□□□□□ -0.2
RPL28-209ENST00000560055 PPA2Q9H2U2 334 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 ZNF581Q9P0T4 197 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 DSCAML1Q8TD84 2053 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 GEMIN2O14893 280 aaKnown RBP13.81□□□□□ -0.2
RPL28-209ENST00000560055 UBBP0CG47 229 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 FGF9P31371 208 aaPredicted RBP13.81□□□□□ -0.2
RPL28-209ENST00000560055 DLX6P56179 175 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 EDDM3BP56851 147 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 MEF2CQ06413 473 aaPredicted RBP13.81□□□□□ -0.2
RPL28-209ENST00000560055 SCN1BQ07699 218 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 EDDM3AQ14507 147 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 METAP1DQ6UB28 335 aaPredicted RBP13.81□□□□□ -0.2
RPL28-209ENST00000560055 VMO1Q7Z5L0 202 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 TMEM104Q8NE00 496 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 TNFRSF14Q92956 283 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 SLC25A28Q96A46 364 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 ZNF69Q9UC07 566 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 STUB1Q9UNE7 303 aa13.81□□□□□ -0.2
RPL28-209ENST00000560055 AK6Q9Y3D8 172 aaKnown RBP13.81□□□□□ -0.2
RPL28-209ENST00000560055 IGHV3OR16-10A0A075B7F0 116 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 CENPVL3A0A0U1RRI6 287 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 SLC17A2O00624 439 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 CCL3L1P16619 93 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 PRTN3P24158 256 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 HTR2CP28335 458 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 P2RX3P56373 397 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 BPIFB3P59826 476 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 PAX5Q02548 391 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 MPV17LQ2QL34 196 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 GPR157Q5UAW9 335 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 C22orf42Q6IC83 251 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 TPRX1Q8N7U7 411 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 OR6M1Q8NGM8 313 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 COQ2Q96H96 371 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 METTL8Q9H825 291 aaKnown RBP13.8□□□□□ -0.2
RPL28-209ENST00000560055 SIRT7Q9NRC8 400 aa13.8□□□□□ -0.2
RPL28-209ENST00000560055 TXNL4BQ9NX01 149 aaKnown RBP13.8□□□□□ -0.2
RPL28-209ENST00000560055 A0A1W2PPH5 198 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 OR7C1O76099 320 aaPredicted RBP13.79□□□□□ -0.2
RPL28-209ENST00000560055 MGMTP16455 207 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 JUNBP17275 347 aaPredicted RBP13.79□□□□□ -0.2
RPL28-209ENST00000560055 CFPP27918 469 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 DLX1P56177 255 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 QRFPP83859 136 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 BLMHQ13867 455 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 TAF9Q16594 264 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 BCL6BQ8N143 479 aaPredicted RBP13.79□□□□□ -0.2
RPL28-209ENST00000560055 C22orf15Q8WYQ4 148 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 LHX4Q969G2 390 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 Q96M66 194 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 SLC6A7Q99884 636 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 BANF2Q9H503 90 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 RCC2Q9P258 522 aaKnown RBP13.79□□□□□ -0.2
RPL28-209ENST00000560055 LINC00312Q9Y6C7 94 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 FBN3Q75N90 2809 aa13.79□□□□□ -0.2
RPL28-209ENST00000560055 hADV38S2A0JD32 116 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A10PA6NDY2 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A18PA6NE21 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A16PA6NEW6 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A20PA6NIJ5 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A8PA6NJQ4 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A7PA6NKC0 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 C17orf98A8MV24 154 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A22PA8MWA6 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A12PA8MX19 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A5PA8MXJ8 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A23PA8MXZ1 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 RNASEK-C17orf49H0YIS7 233 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 HSPB6O14558 160 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 CRTAPO75718 401 aaPredicted RBP13.78□□□□□ -0.2
RPL28-209ENST00000560055 RBP4P02753 201 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A15PP0C7V4 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A13PP0C7W8 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A14PP0C7W9 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FAM90A24PP0C7X0 464 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 ZNF728P0DKX0 622 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 SMIM18P0DKX4 95 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 VSIG8P0DPA2 414 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 CD36P16671 472 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 FPR2P25090 351 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 KCNJ3P48549 501 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 PSMD7P51665 324 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 AESQ08117 197 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 ATXN7L3Q14CW9 347 aaPredicted RBP13.78□□□□□ -0.2
RPL28-209ENST00000560055 PAN3Q58A45 887 aaKnown RBP13.78□□□□□ -0.2
RPL28-209ENST00000560055 HCP5Q6MZN7 132 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 BRD3OSQ6XYD6 125 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 USP43Q70EL4 1123 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 SUMF2Q8NBJ7 301 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 DPCDQ9BVM2 203 aaPredicted RBP13.78□□□□□ -0.2
RPL28-209ENST00000560055 SELENOIQ9C0D9 397 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 CST11Q9H112 138 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 OR51E2Q9H255 320 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 NCOR1P1Q9H4R4 102 aa13.78□□□□□ -0.2
RPL28-209ENST00000560055 VCX3AQ9NNX9 186 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms