RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 RBM39Q14498 530 aaKnown RBP10.13□□□□□ -0.79
SNX1-209ENST00000559961 PRAMEF5Q5TYX0 476 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 LHFPL3Q86UP9 236 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 LYG1Q8N1E2 194 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 SYS1Q8N2H4 156 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 CBR4Q8N4T8 237 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 OR5AU1Q8NGC0 362 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 OR5D18Q8NGL1 313 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 CORO2AQ92828 525 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 NR1H4Q96RI1 486 aaPredicted RBP10.13□□□□□ -0.79
SNX1-209ENST00000559961 LIN7BQ9HAP6 207 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 IL36RNQ9UBH0 155 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 AMMECR1Q9Y4X0 333 aaPredicted RBP10.13□□□□□ -0.79
SNX1-209ENST00000559961 ODAMA1E959 279 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 ZNF729A6NN14 1252 aaPredicted RBP10.12□□□□□ -0.79
SNX1-209ENST00000559961 OOSP1A8MZH6 123 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 SULT1B1O43704 296 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 ALX3O95076 343 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 CD33P20138 364 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 NFYBP25208 207 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 LMO1P25800 156 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 NANOS3P60323 173 aaKnown RBP10.12□□□□□ -0.79
SNX1-209ENST00000559961 RAB40BQ12829 278 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 MED21Q13503 144 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 HABP2Q14520 560 aaPredicted RBP10.12□□□□□ -0.79
SNX1-209ENST00000559961 RSU1Q15404 277 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 KISS1Q15726 138 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 C9orf152Q5JTZ5 239 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 CCBE1Q6UXH8 406 aaPredicted RBP10.12□□□□□ -0.79
SNX1-209ENST00000559961 ZNF555Q8NEP9 628 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 OR4X2Q8NGF9 303 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 RPEQ96AT9 228 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 LGALS12Q96DT0 336 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 PELI1Q96FA3 418 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 SPACA5Q96QH8 159 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 FAM192AQ9GZU8 254 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 SERTAD4Q9NUC0 356 aa10.12□□□□□ -0.79
SNX1-209ENST00000559961 CHCHD3Q9NX63 227 aaKnown RBP10.12□□□□□ -0.79
SNX1-209ENST00000559961 TCRBV4S1A1TA0A5B7 111 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 IRGMA1A4Y4 181 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 OR4C45A6NMZ5 311 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 G3V4G9 280 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 PF4P02776 101 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 CSN2P05814 226 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 GLIPR1P48060 266 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 BLCAPP62952 87 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 PPP3R1P63098 170 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 PAN3Q58A45 887 aaKnown RBP10.11□□□□□ -0.79
SNX1-209ENST00000559961 ZNF691Q5VV52 312 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 TMPRSS11AQ6ZMR5 421 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 OR4P4Q8NGL7 312 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 CITED2Q99967 270 aaPredicted RBP10.11□□□□□ -0.79
SNX1-209ENST00000559961 SLC25A33Q9BSK2 321 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 FAM118AQ9NWS6 357 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 PAK1IP1Q9NWT1 392 aaPredicted RBP10.11□□□□□ -0.79
SNX1-209ENST00000559961 MYRFQ9Y2G1 1151 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 PKD1L1Q8TDX9 2849 aa10.11□□□□□ -0.79
SNX1-209ENST00000559961 TET2Q6N021 2002 aaPredicted RBP10.11□□□□□ -0.79
SNX1-209ENST00000559961 MEIKINA0A087WXM9 373 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 LOC100130705A0A1B0GUX0 176 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 A0A1W2PRX2 142 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 FAM90A22PA8MWA6 464 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 H0YJX3 145 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 J3QRE1 110 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 CSTBP04080 98 aaKnown RBP10.1□□□□□ -0.79
SNX1-209ENST00000559961 GLP1RP43220 463 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 OR3A4PP47883 348 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 KCNJ3P48549 501 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 ATXN7L3Q14CW9 347 aaPredicted RBP10.1□□□□□ -0.79
SNX1-209ENST00000559961 BEAN1Q3B7T3 259 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 FBLN7Q53RD9 439 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 KHDC1LQ5JSQ8 128 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 PARP16Q8N5Y8 322 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 OR51A4Q8NGJ6 313 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 OR9G1Q8NH87 305 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 TNFAIP8L1Q8WVP5 186 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 MMP28Q9H239 520 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 AMBNQ9NP70 447 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 ERVK13-1Q9NX77 482 aa10.1□□□□□ -0.79
SNX1-209ENST00000559961 TSSC4Q9Y5U2 329 aaPredicted RBP10.1□□□□□ -0.79
SNX1-209ENST00000559961 KBTBD11-OT1A0A1B0GTJ5 212 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 FAM172BPA6NC97 362 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 BUB1B-PAK6H3BSN5 160 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 SLC33A1O00400 549 aaPredicted RBP10.09□□□□□ -0.79
SNX1-209ENST00000559961 HSPB6O14558 160 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 PIN1P1O15428 100 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 OR2F2O95006 317 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 BAG2O95816 211 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 MYL12AP19105 171 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 HES1Q14469 280 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 HLA-DRB5Q30154 266 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 ABCA11PQ4W5N1 156 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 TPTE2P1Q5T6R2 138 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 SAMD5Q5TGI4 173 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 TCF23Q7RTU1 214 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 PXT1Q8NFP0 134 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 OR10X1Q8NGY0 326 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 OR10AC1Q8NH08 325 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 RHOXF1Q8NHV9 184 aa10.09□□□□□ -0.79
SNX1-209ENST00000559961 MRAPQ8TCY5 172 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms