RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 TPRX1Q8N7U7 411 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 SPERTQ8NA61 448 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 CHST4Q8NCG5 386 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 PXT1Q8NFP0 134 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 OR51T1Q8NGJ9 327 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 UBALD1Q8TB05 177 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 PLPPR1Q8TBJ4 325 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 NUDCD2Q8WVJ2 157 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 MAFIPQ8WZ33 124 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 AP3S1Q92572 193 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 FOXRED1Q96CU9 486 aaPredicted RBP4.35□□□□□ -1.71
SPG11-220ENST00000559933 C14orf79Q96F83 325 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 ARHGAP5-AS1Q96IT6 56 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 GAFA1Q96PS6 74 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 S100A13Q99584 98 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 CCL13Q99616 98 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 PPA2Q9H2U2 334 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 HES4Q9HCC6 221 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 IL36GQ9NZH8 169 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 ABRACLQ9P1F3 81 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 NLKQ9UBE8 527 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 RNF7Q9UBF6 113 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 CTSZQ9UBR2 303 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 DNAJB11Q9UBS4 358 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 ST3GAL6Q9Y274 331 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 POLDIP2Q9Y2S7 368 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 KCNK7Q9Y2U2 307 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 NOP16Q9Y3C1 178 aaKnown RBP4.35□□□□□ -1.71
SPG11-220ENST00000559933 WIPI2Q9Y4P8 454 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 PDZD2O15018 2839 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 TRAV18A0A075B6X5 111 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 IGHV4-30-2A0A087WSY4 118 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 TRAV24A0A0B4J272 114 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 TMEM235A6NFC5 223 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 OOEPA6NGQ2 149 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 OR2AT4A6NND4 320 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 RAB27BO00194 218 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 SLC33A1O00400 549 aaPredicted RBP4.34□□□□□ -1.71
SPG11-220ENST00000559933 PPIHO43447 177 aaKnown RBP4.34□□□□□ -1.71
SPG11-220ENST00000559933 LANCL1O43813 399 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 SSX5O60225 188 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 GOSR1O95249 250 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 CYB5AP00167 134 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 LHBP01229 141 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 IGHV2-70P01814 119 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 CSTBP04080 98 aaKnown RBP4.34□□□□□ -1.71
SPG11-220ENST00000559933 PSG2P11465 335 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 GTF2F2P13984 249 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 ZNF44P15621 663 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 BLVRBP30043 206 aaPredicted RBP4.34□□□□□ -1.71
SPG11-220ENST00000559933 SSTR2P30874 369 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 IL2RGP31785 369 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 GABRA2P47869 451 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 PITPNBP48739 271 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 EFNA4P52798 201 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 ART1P52961 327 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 TMEM50BP56557 158 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 DGCR2P98153 550 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 COL10A1Q03692 680 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 PRB3Q04118 309 aaPredicted RBP4.34□□□□□ -1.71
SPG11-220ENST00000559933 IL18Q14116 193 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 ZNF79Q15937 498 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 HFEQ30201 348 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 PCGF3Q3KNV8 242 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 TMEM69Q5SWH9 247 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 STUMQ69YW2 141 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 FAM53AQ6NSI3 398 aaPredicted RBP4.34□□□□□ -1.71
SPG11-220ENST00000559933 MZT2AQ6P582 158 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 FAM131AQ6UXB0 335 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 OR2W3Q7Z3T1 314 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 CROCCP3Q8IVE0 287 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 CDH26Q8IXH8 852 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 SAXO1Q8IYX7 474 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 ASCC1Q8N9N2 400 aaKnown RBP4.34□□□□□ -1.71
SPG11-220ENST00000559933 ZSCAN4Q8NAM6 433 aaPredicted RBP4.34□□□□□ -1.71
SPG11-220ENST00000559933 SUMF2Q8NBJ7 301 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 ZNRF1Q8ND25 227 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 MAPK1IP1LQ8NDC0 245 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 OR4S1Q8NGB4 309 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 OR11L1Q8NGX0 322 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 KCNG3Q8TAE7 436 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 Q8TCH9 128 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 ACOT12Q8WYK0 555 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 RDH5Q92781 318 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 CPNE2Q96FN4 548 aaPredicted RBP4.34□□□□□ -1.71
SPG11-220ENST00000559933 DIRAS2Q96HU8 199 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 WDFY2Q96P53 400 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 ABHD1Q96SE0 405 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 SDHCQ99643 169 aaPredicted RBP4.34□□□□□ -1.71
SPG11-220ENST00000559933 SULT4A1Q9BR01 284 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 TMEM246Q9BRR3 403 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 DCTN5Q9BTE1 182 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 FAAP24Q9BTP7 215 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 TM2D1Q9BX74 207 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 PECRQ9BY49 303 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 BPESC1Q9GZL8 116 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 EGLN1Q9GZT9 426 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 RAB1BQ9H0U4 201 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 CST11Q9H112 138 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 CDIP1Q9H305 208 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms