RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 HLA-DQB1P01920 261 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 GSTP1P09211 210 aaKnown RBP8.71□□□□□ -1.02
TPM1-221ENST00000559831 CD3GP09693 182 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 DUX4L2P0CJ85 424 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 DUX4L3P0CJ86 424 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 DUX4L4P0CJ87 422 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 DUX4L5P0CJ88 424 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 DUX4L6P0CJ89 424 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 DUX4L7P0CJ90 424 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 SELLP14151 372 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 PAX1P15863 534 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 AMY2BP19961 511 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 PTBP1P26599 531 aaKnown RBP eCLIP8.71□□□□□ -1.027e-7■■■□□ 17
TPM1-221ENST00000559831 PRSS3P35030 304 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 IL13RA1P78552 427 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 MRPS15P82914 257 aaKnown RBP8.71□□□□□ -1.02
TPM1-221ENST00000559831 DGCR2P98153 550 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 GUCA2AQ02747 115 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 RBM39Q14498 530 aaKnown RBP8.71□□□□□ -1.02
TPM1-221ENST00000559831 ATXN7L3Q14CW9 347 aaPredicted RBP8.71□□□□□ -1.02
TPM1-221ENST00000559831 ARL6IP1Q15041 203 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 GRK1Q15835 563 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 ZNF79Q15937 498 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 DEFB113Q30KQ7 82 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 DUX4L9Q6RFH8 374 aaPredicted RBP8.71□□□□□ -1.02
TPM1-221ENST00000559831 CLEC2AQ6UVW9 174 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 LYPD2Q6UXB3 125 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 MUC20Q8N307 709 aaPredicted RBP8.71□□□□□ -1.02
TPM1-221ENST00000559831 OR4S1Q8NGB4 309 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 NUDCD2Q8WVJ2 157 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 ST8SIA4Q92187 359 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 FAM168AQ92567 244 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 LURAP1Q96LR2 239 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 CMSS1Q9BQ75 279 aaKnown RBP8.71□□□□□ -1.02
TPM1-221ENST00000559831 SOSTQ9BQB4 213 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 PIMREGQ9BSJ6 248 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 CHMP1AQ9HD42 196 aaPredicted RBP8.71□□□□□ -1.02
TPM1-221ENST00000559831 ETAA1Q9NY74 926 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 DUX4Q9UBX2 424 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 HSF4Q9ULV5 492 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 PCDHB10Q9UN67 800 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 KCNK7Q9Y2U2 307 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 DSCAML1Q8TD84 2053 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 KIAA2026Q5HYC2 2103 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 ANKRD17O75179 2603 aaKnown RBP8.7□□□□□ -1.02
TPM1-221ENST00000559831 DCHS2Q6V1P9 2916 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 MEIOCA2RUB1 952 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 CEACAM18A8MTB9 384 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 SERPINE3A8MV23 424 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 PSPNO60542 156 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 FCER2P06734 321 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 INHBBP09529 407 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 CSF3P09919 207 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 RPS2P15880 293 aaKnown RBP8.7□□□□□ -1.02
TPM1-221ENST00000559831 LMO1P25800 156 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 OR3A1P47881 315 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 EDDM3AQ14507 147 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 PNLIPRP3Q17RR3 467 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 HACD4Q5VWC8 232 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 ZNF788Q6ZQV5 615 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 C17orf107Q6ZR85 190 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 DCDC5Q6ZRR9 648 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 SLC36A1Q7Z2H8 476 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 TRAPPC6BQ86SZ2 158 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 OR8H2Q8N162 312 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 ZNF561Q8N587 486 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 SPICQ8N5J4 248 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 ZNRF1Q8ND25 227 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 OR52I2Q8NH67 350 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 PPP1R35Q8TAP8 253 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 PLPPR1Q8TBJ4 325 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 SETD6Q8TBK2 473 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 C15orf40Q8WUR7 153 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 SDSLQ96GA7 329 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 SNX22Q96L94 193 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 HDHD3Q9BSH5 251 aaPredicted RBP8.7□□□□□ -1.02
TPM1-221ENST00000559831 SRRQ9GZT4 340 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 SEBOXQ9HB31 216 aaPredicted RBP8.7□□□□□ -1.02
TPM1-221ENST00000559831 MAB21L2Q9Y586 359 aa8.7□□□□□ -1.02
TPM1-221ENST00000559831 CTDSPLO15194 276 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 SIGLEC5O15389 551 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 NDUFB3O43676 98 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 NDUFA2O43678 99 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 ZNF737O75373 536 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 TPPPO94811 219 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 TK1P04183 234 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 GLAP06280 429 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 NDUFB7P17568 137 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 PPP5CP53041 499 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 AESQ08117 197 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 TMEM155Q4W5P6 130 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 ATPAF1Q5TC12 328 aaPredicted RBP8.69□□□□□ -1.02
TPM1-221ENST00000559831 Q8N402 240 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 FGFRL1Q8N441 504 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 GDPD1Q8N9F7 314 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 C10orf105Q8TEF2 133 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 FCAMRQ8WWV6 532 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 MED30Q96HR3 178 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 BPESC1Q9GZL8 116 aa8.69□□□□□ -1.02
TPM1-221ENST00000559831 DNTTIP1Q9H147 329 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms