RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 CALCBP10092 127 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 CDK2P24941 298 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 CD34P28906 385 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 MTNR1BP49286 362 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 PRRX1P54821 245 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 AESQ08117 197 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 ZIK1Q3SY52 487 aaPredicted RBP9.85□□□□□ -0.83
SPG11-219ENST00000559822 KRBOX4Q5JUW0 171 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 PRAMEF5Q5TYX0 476 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 CCDC144NLQ6NUI1 221 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 LYG1Q8N1E2 194 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 CBR4Q8N4T8 237 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 OR51A4Q8NGJ6 313 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 OR5D18Q8NGL1 313 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 OR10AC1Q8NH08 325 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 WIPF2Q8TF74 440 aaPredicted RBP9.85□□□□□ -0.83
SPG11-219ENST00000559822 TSEN15Q8WW01 171 aaKnown RBP9.85□□□□□ -0.83
SPG11-219ENST00000559822 STMN2Q93045 179 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 SPACA5Q96QH8 159 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 OR5M11Q96RB7 305 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 C9orf16Q9BUW7 83 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 DHDHQ9UQ10 334 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 MYRFQ9Y2G1 1151 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 CMYA5Q8N3K9 4069 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 PLXNB1O43157 2135 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 OOSP1A8MZH6 123 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 E9PQ18 207 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 M0QZK8 103 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 MAGEB3O15480 346 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 MMP23AO75900 390 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 MNDAP41218 407 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 GLIPR1P48060 266 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 GBX2P52951 348 aaPredicted RBP9.84□□□□□ -0.83
SPG11-219ENST00000559822 BLCAPP62952 87 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 SCN1BQ07699 218 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 RAB40BQ12829 278 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 KISS1Q15726 138 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 LHFPL3Q86UP9 236 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 PARP16Q8N5Y8 322 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 ZNF565Q8N9K5 539 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 OR5AK2Q8NH90 309 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 CITED2Q99967 270 aaPredicted RBP9.84□□□□□ -0.83
SPG11-219ENST00000559822 MMP28Q9H239 520 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 PCDHB16Q9NRJ7 776 aa9.84□□□□□ -0.83
SPG11-219ENST00000559822 A0A087X0M5 115 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 A0A1B0GX30 115 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 H3BNX3 289 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 SLC33A1O00400 549 aaPredicted RBP9.83□□□□□ -0.84
SPG11-219ENST00000559822 OR2F2O95006 317 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 IGLV1-47P01700 117 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 CD2P06729 351 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 GABRB1P18505 474 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 RAB3AP20336 220 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 KCNJ3P48549 501 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 ATXN7L3Q14CW9 347 aaPredicted RBP9.83□□□□□ -0.84
SPG11-219ENST00000559822 HLA-DRB5Q30154 266 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 ZNF691Q5VV52 312 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 HIST2H2BDQ6DRA6 164 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 ELP2Q6IA86 826 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 Q6P435 159 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 CCDC121Q6ZUS5 278 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 PXT1Q8NFP0 134 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 OR5AU1Q8NGC0 362 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 GPER1Q99527 375 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 OCSTAMPQ9BR26 566 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 SLC25A33Q9BSK2 321 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 NCOR1P1Q9H4R4 102 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 ERVK13-1Q9NX77 482 aa9.83□□□□□ -0.84
SPG11-219ENST00000559822 RPL36Q9Y3U8 105 aaKnown RBP9.83□□□□□ -0.84
SPG11-219ENST00000559822 AMMECR1Q9Y4X0 333 aaPredicted RBP9.83□□□□□ -0.84
SPG11-219ENST00000559822 H0YJX3 145 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 BUB1B-PAK6H3BSN5 160 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 ZFPL1O95159 310 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 PF4V1P10720 104 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 JUNBP17275 347 aaPredicted RBP9.82□□□□□ -0.84
SPG11-219ENST00000559822 C21orf33P30042 268 aaPredicted RBP9.82□□□□□ -0.84
SPG11-219ENST00000559822 ZP1P60852 638 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 RBM39Q14498 530 aaKnown RBP9.82□□□□□ -0.84
SPG11-219ENST00000559822 IL13RA2Q14627 380 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 TMEM95Q3KNT9 176 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 KLHL22Q53GT1 634 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 FBLN7Q53RD9 439 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 PAN3Q58A45 887 aaKnown RBP9.82□□□□□ -0.84
SPG11-219ENST00000559822 Q6ZS46 218 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 CENPVQ7Z7K6 275 aaPredicted RBP9.82□□□□□ -0.84
SPG11-219ENST00000559822 OR4X2Q8NGF9 303 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 OR51T1Q8NGJ9 327 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 OR9G1Q8NH87 305 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 RHOXF1Q8NHV9 184 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 COQ2Q96H96 371 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 RBM14Q96PK6 669 aaKnown RBP9.82□□□□□ -0.84
SPG11-219ENST00000559822 PDCD1LG2Q9BQ51 273 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 BARHL1Q9BZE3 327 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 ZNF286AQ9HBT8 521 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 ING3Q9NXR8 418 aa9.82□□□□□ -0.84
SPG11-219ENST00000559822 MEIKINA0A087WXM9 373 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 KBTBD11-OT1A0A1B0GTJ5 212 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 LOC100130705A0A1B0GUX0 176 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 FAM172BPA6NC97 362 aa9.81□□□□□ -0.84
SPG11-219ENST00000559822 ADARB2-AS1A8MUL3 147 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms