RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 GHRLQ9UBU3 117 aa16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 SSR3Q9UNL2 185 aa16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 V9GY05 133 aa16.68■□□□□ 0.26
TSPAN3-207ENST00000559494 IGHV3OR16-10A0A075B7F0 116 aa16.67■□□□□ 0.26
TSPAN3-207ENST00000559494 GADD45AP24522 165 aa16.67■□□□□ 0.26
TSPAN3-207ENST00000559494 ZNF273Q14593 569 aa16.67■□□□□ 0.26
TSPAN3-207ENST00000559494 TAF9Q16594 264 aa16.67■□□□□ 0.26
TSPAN3-207ENST00000559494 OR10K2Q6IF99 312 aa16.67■□□□□ 0.26
TSPAN3-207ENST00000559494 C1orf122Q6ZSJ8 110 aa16.67■□□□□ 0.26
TSPAN3-207ENST00000559494 MRPS24Q96EL2 167 aaKnown RBP16.67■□□□□ 0.26
TSPAN3-207ENST00000559494 VCX3AQ9NNX9 186 aa16.67■□□□□ 0.26
TSPAN3-207ENST00000559494 NUP50Q9UKX7 468 aa16.67■□□□□ 0.26
TSPAN3-207ENST00000559494 MEX3AA1L020 520 aaKnown RBP16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 M0R1W7 72 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 SLC17A2O00624 439 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 OR7C1O76099 320 aaPredicted RBP16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 UBBP0CG47 229 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 VSIG8P0DPA2 414 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 MGMTP16455 207 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 CCL3L1P16619 93 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 ERP29P30040 261 aaKnown RBP16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 DLX1P56177 255 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 AESQ08117 197 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 TCF23Q7RTU1 214 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 VMO1Q7Z5L0 202 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 CMTM4Q8IZR5 234 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 C11orf42Q8N5U0 333 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 OR6M1Q8NGM8 313 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 CHCHD6Q9BRQ6 235 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 SELENOIQ9C0D9 397 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 IFT22Q9H7X7 185 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 ZNF69Q9UC07 566 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 CUBNO60494 3623 aa16.66■□□□□ 0.26
TSPAN3-207ENST00000559494 TRAV40A0A0B4J280 105 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 CENPVL3A0A0U1RRI6 287 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 HSPB6O14558 160 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 CRTAPO75718 401 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 EPHA1P21709 976 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 MYL9P24844 172 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 GLIPR1P48060 266 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 PSMD7P51665 324 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 DLX6P56179 175 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 OR10A3P58181 314 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 ERVFRD-1P60508 538 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 QRFPP83859 136 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 PRB3Q04118 309 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 MEF2CQ06413 473 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 P2RY14Q15391 338 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 MPV17LQ2QL34 196 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 PAN3Q58A45 887 aaKnown RBP16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 LINC00596Q86U02 117 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 BPIFB2Q8N4F0 458 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 FAM46BQ96A09 425 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 YIPF6Q96EC8 236 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 COQ2Q96H96 371 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 KCNK15Q9H427 330 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 RNF167Q9H6Y7 350 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 PLGRKTQ9HBL7 147 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 SIRT7Q9NRC8 400 aa16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 SOX21Q9Y651 276 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-207ENST00000559494 PDCD5O14737 125 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 MPIG6BO95866 241 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 CSN2P05814 226 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 RAB3BP20337 219 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 P2RX3P56373 397 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 RAB11BQ15907 218 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 BRICD5Q6PL45 260 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 NR2C2APQ86WQ0 139 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 BCL6BQ8N143 479 aaPredicted RBP16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 SUMF2Q8NBJ7 301 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 C22orf15Q8WYQ4 148 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 TNFRSF14Q92956 283 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 LHX4Q969G2 390 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 Q96M66 194 aa16.64■□□□□ 0.25
TSPAN3-207ENST00000559494 hADV38S2A0JD32 116 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 TMEM14DPA8MWL7 114 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 BPNT1O95861 308 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 PRTN3P24158 256 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 CLDN12P56749 244 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 UNC119Q13432 240 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 BLMHQ13867 455 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 ATXN7L3Q14CW9 347 aaPredicted RBP16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 KRBOX4Q5JUW0 171 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 ATAD3CQ5T2N8 411 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 HES5Q5TA89 166 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 SIGIRRQ6IA17 410 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 PLPPR1Q8TBJ4 325 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 CENPOQ9BU64 300 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 DPCDQ9BVM2 203 aaPredicted RBP16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 CST11Q9H112 138 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 UNKLQ9H9P5 680 aaKnown RBP16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 ING3Q9NXR8 418 aa16.63■□□□□ 0.25
TSPAN3-207ENST00000559494 LOC100506127A0A0U1RQW1 187 aa16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 A0A1W2PPH5 198 aa16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 C17orf98A8MV24 154 aa16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 ZNF728P0DKX0 622 aa16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 GPR157Q5UAW9 335 aa16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 BRD3OSQ6XYD6 125 aa16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 PDZD9Q8IXQ8 264 aa16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 OR51D1Q8NGF3 324 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms