RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 LGALS12Q96DT0 336 aa11.96□□□□□ -0.49
LRRC28-213ENST00000559399 ZCCHC4Q9H5U6 513 aa11.96□□□□□ -0.49
LRRC28-213ENST00000559399 NECAP2Q9NVZ3 263 aa11.96□□□□□ -0.49
LRRC28-213ENST00000559399 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.96□□□□□ -0.49
LRRC28-213ENST00000559399 EXOGQ9Y2C4 368 aaKnown RBP11.96□□□□□ -0.49
LRRC28-213ENST00000559399 SLC33A1O00400 549 aaPredicted RBP11.95□□□□□ -0.5
LRRC28-213ENST00000559399 TOR1AO14656 332 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 IGLV1-47P01700 117 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 HCKP08631 526 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 RPSAP08865 295 aaKnown RBP11.95□□□□□ -0.5
LRRC28-213ENST00000559399 CD24P25063 80 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 CD34P28906 385 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 GDNFP39905 211 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 CEACAM3P40198 252 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 CD83Q01151 205 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 ZIK1Q3SY52 487 aaPredicted RBP11.95□□□□□ -0.5
LRRC28-213ENST00000559399 KRBOX4Q5JUW0 171 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 RNF144BQ7Z419 303 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 SYS1Q8N2H4 156 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 OR4D6Q8NGJ1 314 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 SGCDQ92629 289 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 COQ2Q96H96 371 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 ALG8Q9BVK2 526 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 ZNF286AQ9HBT8 521 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 ING3Q9NXR8 418 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 OR6C3Q9NZP0 311 aa11.95□□□□□ -0.5
LRRC28-213ENST00000559399 A0A087X0M5 115 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 A0A1B0GX30 115 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 A0A1W2PRX2 142 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 E9PQ18 207 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 H3BNX3 289 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 DEGS1O15121 323 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 OR2F2O95006 317 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 TMEM225BP0DP42 221 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 PF4V1P10720 104 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 DBTP11182 482 aaKnown RBP11.94□□□□□ -0.5
LRRC28-213ENST00000559399 GALEQ14376 348 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 ATXN7L3Q14CW9 347 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-213ENST00000559399 KISS1Q15726 138 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 HLA-DRB5Q30154 266 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 TPTE2P1Q5T6R2 138 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 CCDC144NLQ6NUI1 221 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 ZFP1Q6P2D0 407 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 Q6P435 159 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 SERPINA12Q8IW75 414 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 CBR4Q8N4T8 237 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 OR5D14Q8NGL3 314 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 MRAPQ8TCY5 172 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 PHF21AQ96BD5 680 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 CPNE2Q96FN4 548 aaPredicted RBP11.94□□□□□ -0.5
LRRC28-213ENST00000559399 SLC25A33Q9BSK2 321 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 MYRFQ9Y2G1 1151 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 GMPPBQ9Y5P6 360 aa11.94□□□□□ -0.5
LRRC28-213ENST00000559399 TMEM212A6NML5 194 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 ZNF729A6NN14 1252 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-213ENST00000559399 OOSP1A8MZH6 123 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 BUB1B-PAK6H3BSN5 160 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 SULT1B1O43704 296 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 ALX3O95076 343 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 ZFPL1O95159 310 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 FADS2O95864 444 aaKnown RBP11.93□□□□□ -0.5
LRRC28-213ENST00000559399 LPLP06858 475 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 CD33P20138 364 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 MNDAP41218 407 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 MTNR1BP49286 362 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 PRRX1P54821 245 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 ZP1P60852 638 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 MRPL28Q13084 256 aaKnown RBP11.93□□□□□ -0.5
LRRC28-213ENST00000559399 RBM39Q14498 530 aaKnown RBP11.93□□□□□ -0.5
LRRC28-213ENST00000559399 CDK5R1Q15078 307 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 C17orf58Q2M2W7 97 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 ABCA11PQ4W5N1 156 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 CENPVQ7Z7K6 275 aaPredicted RBP11.93□□□□□ -0.5
LRRC28-213ENST00000559399 LHFPL3Q86UP9 236 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 PARP16Q8N5Y8 322 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 RBM14Q96PK6 669 aaKnown RBP11.93□□□□□ -0.5
LRRC28-213ENST00000559399 PPIL3Q9H2H8 161 aaKnown RBP11.93□□□□□ -0.5
LRRC28-213ENST00000559399 ISG20L2Q9H9L3 353 aaKnown RBP11.93□□□□□ -0.5
LRRC28-213ENST00000559399 INPP5EQ9NRR6 644 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 AASSQ9UDR5 926 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 DHDHQ9UQ10 334 aa11.93□□□□□ -0.5
LRRC28-213ENST00000559399 KBTBD11-OT1A0A1B0GTJ5 212 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 TCRBV4S1A1TA0A5B7 111 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 H0YJX3 145 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 M0QZK8 103 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 HSPB6O14558 160 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 MPZL2O60487 215 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 CCDC159P0C7I6 412 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 GABRB1P18505 474 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 OR3A4PP47883 348 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 LOXL3P58215 753 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 TCTEX1D4Q5JR98 221 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 ZNF691Q5VV52 312 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 LPCAT4Q643R3 524 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 CCDC121Q6ZUS5 278 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 WFDC9Q8NEX5 89 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 OR4X2Q8NGF9 303 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 OR5AK2Q8NH90 309 aa11.92□□□□□ -0.5
LRRC28-213ENST00000559399 TSEN15Q8WW01 171 aaKnown RBP11.92□□□□□ -0.5
LRRC28-213ENST00000559399 Q96MT0 163 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms