RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 TUBA4BQ9H853 241 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 PLSCR2Q9NRY7 297 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 SLC7A10Q9NS82 523 aa14.28□□□□□ -0.12
SPG11-215ENST00000559193 RPL36A-HNRNPH2H7BZ11 118 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 AGAP20933 346 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 DPPA2Q7Z7J5 298 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 TBC1D26Q86UD7 250 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 FGF23Q9GZV9 251 aaPredicted RBP14.27□□□□□ -0.13
SPG11-215ENST00000559193 IFT22Q9H7X7 185 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 DEPPQ9NTK1 212 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 C5orf52A6NGY3 159 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 TRAPPC6AO75865 159 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 IGHV3-9P01782 118 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 POLR2GP62487 172 aaKnown RBP eCLIP14.27□□□□□ -0.13
SPG11-215ENST00000559193 SRPXP78539 464 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 TRA2AQ13595 282 aaKnown RBP eCLIP14.27□□□□□ -0.13
SPG11-215ENST00000559193 CLINT1Q14677 625 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 PPP1R32Q7Z5V6 425 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 FAM185AQ8N0U4 392 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 Q8NFD4 153 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 TAAR9Q96RI9 348 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 PRDM14Q9GZV8 571 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 SLC35B3Q9H1N7 401 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 CRIM1Q9NZV1 1036 aa14.27□□□□□ -0.13
SPG11-215ENST00000559193 A0A1W2PPE3 182 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 BCL3P20749 454 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 B2MP61769 119 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 TMEM56Q96MV1 263 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 HS3ST6Q96QI5 342 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 TMEM56-RWDD3S4R434 201 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 PINLYPA6NC86 204 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 ZNHIT1O43257 154 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 CYTIPO60759 359 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 NKX2-1P43699 371 aaPredicted RBP14.26□□□□□ -0.13
SPG11-215ENST00000559193 KRBOX4Q5JUW0 171 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 Q6ZS49 121 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 OR56B2PQ8NGI1 322 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 SLAMF9Q96A28 289 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 PBDC1Q9BVG4 233 aa14.26□□□□□ -0.13
SPG11-215ENST00000559193 UBE2J1Q9Y385 318 aaPredicted RBP14.26□□□□□ -0.13
SPG11-215ENST00000559193 ZNF724A8MTY0 619 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 PITX3O75364 302 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 OR13C7P0DN81 318 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 OTX2P32243 289 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 EIF2S3LQ2VIR3 472 aaKnown RBP14.25□□□□□ -0.13
SPG11-215ENST00000559193 ZNF818PQ6ZRF7 136 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 COLCA1Q6ZS62 124 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 SELENOHQ8IZQ5 122 aaKnown RBP14.25□□□□□ -0.13
SPG11-215ENST00000559193 TMEM171Q8WVE6 324 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 GPHA2Q96T91 129 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 Q9N2K0 584 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 KCNJ16Q9NPI9 418 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 FAM86C1Q9NVL1 165 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 hCG_1809904A0A1W2PP81 198 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 A0A1W2PR64 198 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 A0A1W2PRV1 198 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 PATE3B3GLJ2 98 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 UBE2CO00762 179 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 CBR1P16152 277 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 ATP6V0CP27449 155 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 SULT1A1P50225 295 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 HERPUD1Q15011 391 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 RHEBQ15382 184 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 ZNF695Q8IW36 515 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 ZNF561Q8N587 486 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 LFNGQ8NES3 379 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 CD300LFQ8TDQ1 290 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 ABHD14AQ9BUJ0 271 aa14.25□□□□□ -0.13
SPG11-215ENST00000559193 PAPOLGQ9BWT3 736 aaKnown RBP14.25□□□□□ -0.13
SPG11-215ENST00000559193 VPS13AQ96RL7 3174 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 IGKV1D-13A0A0B4J2D9 117 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 A0A1B0GW64 132 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A10PA6NDY2 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A18PA6NE21 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A16PA6NEW6 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A20PA6NIJ5 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A8PA6NJQ4 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A7PA6NKC0 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A22PA8MWA6 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A12PA8MX19 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A5PA8MXJ8 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A23PA8MXZ1 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 SSSCA1O60232 199 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 NAPSAO96009 420 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 SCTP09683 121 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A15PP0C7V4 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A13PP0C7W8 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A14PP0C7W9 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 FAM90A24PP0C7X0 464 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 IGKV1-13P0DP09 117 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 RAB5AP20339 215 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 RND3P61587 244 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 ZNF266Q14584 549 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 CXorf66Q5JRM2 361 aaPredicted RBP14.24□□□□□ -0.13
SPG11-215ENST00000559193 SPIN3Q5JUX0 258 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 GAPTQ8N292 157 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 LILRB1Q8NHL6 650 aaPredicted RBP14.24□□□□□ -0.13
SPG11-215ENST00000559193 POM121Q96HA1 1249 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 RARRES2Q99969 163 aa14.24□□□□□ -0.13
SPG11-215ENST00000559193 MAGT1Q9H0U3 335 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms