RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 SOX2P48431 317 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 DYNC1I2Q13409 638 aaKnown RBP9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 CDK5R1Q15078 307 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 KISS1Q15726 138 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 LY6EQ16553 131 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 CCDC58Q4VC31 144 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 ZNF626Q68DY1 528 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 C11orf88Q6PI97 169 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 TCF23Q7RTU1 214 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 OR4S1Q8NGB4 309 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 OR52N4Q8NGI2 321 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 OR4C13Q8NGP0 309 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 GPR148Q8TDV2 347 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 GPER1Q99527 375 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 FAM192AQ9GZU8 254 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 MEGF9Q9H1U4 602 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 ABCB10Q9NRK6 738 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 EXOSC1Q9Y3B2 195 aaKnown RBP9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 SESN1Q9Y6P5 492 aa9.06□□□□□ -0.96
CHRNA3-205ENST00000559080 ODF3BA8MYP8 253 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 ERP29P30040 261 aaKnown RBP9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 ETV1P50549 477 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 GTF2A1P52655 376 aaPredicted RBP9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 ZP1P60852 638 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 PPP3R1P63098 170 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 SCN1BQ07699 218 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 IL18R1Q13478 541 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 NSUN5P1Q3KNT7 163 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 PLA1AQ53H76 456 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 OR2G6Q5TZ20 316 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 RPL22L1Q6P5R6 122 aaKnown RBP9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 LIAT1Q6ZQX7 453 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 LHFPL4Q7Z7J7 247 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 DHRSXQ8N5I4 330 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 CHST4Q8NCG5 386 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 OR11H6Q8NGC7 330 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 WWC2-AS2Q96NR7 200 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 GAL3ST2Q9H3Q3 398 aa9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 CHCHD3Q9NX63 227 aaKnown RBP9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 DIMT1Q9UNQ2 313 aaKnown RBP9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 UBE2J1Q9Y385 318 aaPredicted RBP9.05□□□□□ -0.96
CHRNA3-205ENST00000559080 IGHV2-26A0A0B4J1V2 119 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 PAX6P26367 422 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 MTNR1BP49286 362 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 XAF1Q6GPH4 301 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 RNF144BQ7Z419 303 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 SATL1Q86VE3 508 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 DTX3Q8N9I9 347 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 OR2T6Q8NHC8 308 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 NDNFQ8TB73 568 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 RPS4Y2Q8TD47 263 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 WIPF2Q8TF74 440 aaPredicted RBP9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 TNFAIP8L1Q8WVP5 186 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 RGP1Q92546 391 aaPredicted RBP9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 TMEM106AQ96A25 262 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 SMIM19Q96E16 107 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 TMEM80Q96HE8 168 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 AJUBAQ96IF1 538 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 CLEC7AQ9BXN2 247 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 NPFFR1Q9GZQ6 430 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 VCXQ9H320 206 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 RANBP3Q9H6Z4 567 aaPredicted RBP9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 TAS2R4Q9NYW5 299 aa9.04□□□□□ -0.96
CHRNA3-205ENST00000559080 ODAMA1E959 279 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 FAM90A8PA6NJQ4 464 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 VGLL3A8MV65 326 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 GABRPO00591 440 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 DEGS1O15121 323 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 CSN2P05814 226 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 VSIG10L2P0DP72 767 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 CD28P10747 220 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 CAPGP40121 348 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 PTGFRP43088 359 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 EMX1Q04741 257 aaPredicted RBP9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 ATXN7L3Q14CW9 347 aaPredicted RBP9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 RSU1Q15404 277 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 SSX2Q16385 188 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 KRBOX4Q5JUW0 171 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 MINOS1Q5TGZ0 78 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 PRAMEF5Q5TYX0 476 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 OR52W1Q6IF63 320 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 C8orf59Q8N0T1 100 aaPredicted RBP9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 WFDC9Q8NEX5 89 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 PXT1Q8NFP0 134 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 OR51A2Q8NGJ7 313 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 OR52N1Q8NH53 320 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 R3HDM4Q96D70 268 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 MALSU1Q96EH3 234 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 NKX3-1Q99801 234 aaPredicted RBP9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 TMEM133Q9H2Q1 129 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 SERTAD4Q9NUC0 356 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 BABAM2Q9NXR7 383 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 ING3Q9NXR8 418 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 PITPNC1Q9UKF7 332 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 TCF19Q9Y242 345 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 MINOS1-NBL1R4GNA1 71 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 HSPE1-MOB4S4R3N1 261 aa9.03□□□□□ -0.96
CHRNA3-205ENST00000559080 DNAH9Q9NYC9 4486 aa9.02□□□□□ -0.97
CHRNA3-205ENST00000559080 EFCAB10A6NFE3 127 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms