RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 AMY2BP19961 511 aa13.49□□□□□ -0.25
CDC42BPB-204ENST00000559043 TAS2R46P59540 309 aa13.49□□□□□ -0.25
CDC42BPB-204ENST00000559043 TMEM128Q5BJH2 165 aa13.49□□□□□ -0.25
CDC42BPB-204ENST00000559043 ZNF295-AS1Q8N0V1 137 aa13.49□□□□□ -0.25
CDC42BPB-204ENST00000559043 SLC25A40Q8TBP6 338 aa13.49□□□□□ -0.25
CDC42BPB-204ENST00000559043 TMEM171Q8WVE6 324 aa13.49□□□□□ -0.25
CDC42BPB-204ENST00000559043 MARS2Q96GW9 593 aaKnown RBP13.49□□□□□ -0.25
CDC42BPB-204ENST00000559043 C5orf66Q9H5L9 145 aa13.49□□□□□ -0.25
CDC42BPB-204ENST00000559043 IGKV1-27A0A075B6S5 117 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 MPV17P39210 176 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 SNU13P55769 128 aaKnown RBP13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 FAM3AP98173 230 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 C11orf87Q6NUJ2 197 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 VHLLQ6RSH7 139 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 LHFPL2Q6ZUX7 228 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 ZNF546Q86UE3 836 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 COMMD7Q86VX2 200 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 LRP11Q86VZ4 500 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 SCGB3A2Q96PL1 93 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 ST6GALNAC5Q9BVH7 336 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 METTL9Q9H1A3 318 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 ELL3Q9HB65 397 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 RNF115Q9Y4L5 304 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 CENPEQ02224 2701 aa13.48□□□□□ -0.25
CDC42BPB-204ENST00000559043 CCSO14618 274 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 TMEM225BP0DP42 221 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 VAMP1P23763 118 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 FPR2P25090 351 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 ZNF345Q14585 488 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 OR8B8Q15620 311 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 ALKBH6Q3KRA9 238 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 AADACL3Q5VUY0 350 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 TMEM17Q86X19 198 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 OR5AP2Q8NGF4 316 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 OR13G1Q8NGZ3 307 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 SCARB1Q8WTV0 552 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 PCNPQ8WW12 178 aaKnown RBP13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 SPSB4Q96A44 273 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 TMEM230Q96A57 120 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 PDCD10Q9BUL8 212 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 TNFSF18Q9UNG2 199 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 ATP23Q9Y6H3 246 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 FBN2P35556 2912 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 A0A0D9SG52 128 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 NRASP01111 189 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 GLRXP35754 106 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 RBP2P50120 134 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 FABP6P51161 128 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 TOR2AQ5JU69 321 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 OVCH2Q7RTZ1 564 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 SLC51BQ86UW2 128 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 CSNK2A3Q8NEV1 391 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 NUP37Q8NFH4 326 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 KLF14Q8TD94 323 aaPredicted RBP13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 CASTOR1Q8WTX7 329 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 PPP1R1CQ8WVI7 109 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 SEC22AQ96IW7 307 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 REPIN1Q9BWE0 567 aaKnown RBP13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 COMMD9Q9P000 198 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 HSF4Q9ULV5 492 aa13.47□□□□□ -0.25
CDC42BPB-204ENST00000559043 A0A0B4J2A0 478 aa13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 XRCC2O43543 280 aa13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 LILRA1O75019 489 aa13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 NPY4RP50391 375 aa13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 C6orf201Q7Z4U5 140 aa13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 KCNRGQ8N5I3 272 aa13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 RTBDNQ9BSG5 229 aaPredicted RBP13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 BCL2L14Q9BZR8 327 aa13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 MED9Q9NWA0 146 aa13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 SHPKQ9UHJ6 478 aa13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 TACC2O95359 2948 aa13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 PTPN13Q12923 2485 aa13.46□□□□□ -0.25
CDC42BPB-204ENST00000559043 FAM230AA0A1W2PPH8 454 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 OR2F2O95006 317 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 SFT2D2O95562 160 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 COX6B1P14854 86 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 GABRR1P24046 479 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 AP2S1P53680 142 aaPredicted RBP13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 PSG7Q13046 419 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 OR2F1Q13607 317 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 RSU1Q15404 277 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 ADIPOQQ15848 244 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 ZNF660Q6AZW8 331 aaPredicted RBP13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 SIGIRRQ6IA17 410 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 EMG1Q92979 244 aaKnown RBP13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 BORCS8Q96FH0 119 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 TECTBQ96PL2 329 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 PPA2Q9H2U2 334 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 PLEKHJ1Q9NW61 149 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 IL36GQ9NZH8 169 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 J3QW42 95 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 SPRY1O43609 319 aaPredicted RBP13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 ANGPTL7O43827 346 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 HTR3BO95264 441 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 CSTBP04080 98 aaKnown RBP13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 NMBP08949 121 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 ZNF250P15622 560 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 FUT6P51993 359 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 ATP1B3P54709 279 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 SURF2Q15527 256 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms