RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 LIMS3P0CW19 117 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 LIMS4P0CW20 117 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 CDK2P24941 298 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 GTF2A1P52655 376 aaPredicted RBP12.15□□□□□ -0.46
SMAD6-203ENST00000558937 SCN1BQ07699 218 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 SMN1Q16637 294 aaKnown RBP12.15□□□□□ -0.46
SMAD6-203ENST00000558937 KLHL22Q53GT1 634 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 HEPN1Q6WQI6 88 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 CHST4Q8NCG5 386 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 OR5D14Q8NGL3 314 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 CORO2AQ92828 525 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 COQ2Q96H96 371 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 JAM3Q9BX67 310 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 FGF20Q9NP95 211 aaPredicted RBP12.15□□□□□ -0.46
SMAD6-203ENST00000558937 ING3Q9NXR8 418 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 SMPD3Q9NY59 655 aaPredicted RBP12.15□□□□□ -0.46
SMAD6-203ENST00000558937 TAS2R3Q9NYW6 316 aa12.15□□□□□ -0.46
SMAD6-203ENST00000558937 NOTCH1P46531 2555 aa12.15□□□□□ -0.47
SMAD6-203ENST00000558937 VWFP04275 2813 aa12.15□□□□□ -0.47
SMAD6-203ENST00000558937 FAM172BPA6NC97 362 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 GABRPO00591 440 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 HTR1DP28221 377 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 SOX2P48431 317 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 MTNR1BP49286 362 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 ATXN7L3Q14CW9 347 aaPredicted RBP12.14□□□□□ -0.47
SMAD6-203ENST00000558937 CDK5R1Q15078 307 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 ZSCAN26Q16670 478 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 KRBOX4Q5JUW0 171 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 XAF1Q6GPH4 301 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 OR52W1Q6IF63 320 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 C1QL4Q86Z23 238 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 ABHD12Q8N2K0 398 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 ZNF555Q8NEP9 628 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 OR51A2Q8NGJ7 313 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 HAVCR2Q8TDQ0 301 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 RDH12Q96NR8 316 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 PRSS22Q9GZN4 317 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 PPIL3Q9H2H8 161 aaKnown RBP12.14□□□□□ -0.47
SMAD6-203ENST00000558937 TAS2R4Q9NYW5 299 aa12.14□□□□□ -0.47
SMAD6-203ENST00000558937 FAM90A22PA8MWA6 464 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 DEGS1O15121 323 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 FBXO24O75426 580 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 RAB3AP20336 220 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 CD34P28906 385 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 PTGFRP43088 359 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 ZNF529Q6P280 563 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 Q6ZS46 218 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 RTN4RL2Q86UN3 420 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 PXT1Q8NFP0 134 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 ZNF596Q8TC21 504 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 TNFAIP8L1Q8WVP5 186 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 CPNE2Q96FN4 548 aaPredicted RBP12.13□□□□□ -0.47
SMAD6-203ENST00000558937 ZNF286AQ9HBT8 521 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 DPM3Q9P2X0 92 aa12.13□□□□□ -0.47
SMAD6-203ENST00000558937 H0YJX3 145 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 HSPB6O14558 160 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 CLIC3O95833 236 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 IGLV1-47P01700 117 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 CD28P10747 220 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 ETV1P50549 477 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 BDH1Q02338 343 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 C17orf58Q2M2W7 97 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 TMEM95Q3KNT9 176 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 OR2G6Q5TZ20 316 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 ELP2Q6IA86 826 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 RPL22L1Q6P5R6 122 aaKnown RBP12.12□□□□□ -0.47
SMAD6-203ENST00000558937 SATL1Q86VE3 508 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 LYG1Q8N1E2 194 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 OR10K1Q8NGX5 313 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 CNIH3Q8TBE1 160 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 GPR148Q8TDV2 347 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 WIPF2Q8TF74 440 aaPredicted RBP12.12□□□□□ -0.47
SMAD6-203ENST00000558937 NR1H4Q96RI1 486 aaPredicted RBP12.12□□□□□ -0.47
SMAD6-203ENST00000558937 GPER1Q99527 375 aa12.12□□□□□ -0.47
SMAD6-203ENST00000558937 PLXNB1O43157 2135 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 ZNF729A6NN14 1252 aaPredicted RBP12.11□□□□□ -0.47
SMAD6-203ENST00000558937 MAGEB3O15480 346 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 DCKP27707 260 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 GLP1RP43220 463 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 BLCAPP62952 87 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 IL13RA2Q14627 380 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 HLA-DRB5Q30154 266 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 CCDC58Q4VC31 144 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 PAN3Q58A45 887 aaKnown RBP12.11□□□□□ -0.47
SMAD6-203ENST00000558937 ARSJQ5FYB0 599 aaPredicted RBP12.11□□□□□ -0.47
SMAD6-203ENST00000558937 UTF1Q5T230 341 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 OR4D6Q8NGJ1 314 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 OR51T1Q8NGJ9 327 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 STMN2Q93045 179 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 OR5M11Q96RB7 305 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 WNT10AQ9GZT5 417 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 FAM192AQ9GZU8 254 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 OR6C3Q9NZP0 311 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 KIF25Q9UIL4 384 aa12.11□□□□□ -0.47
SMAD6-203ENST00000558937 SIRT4Q9Y6E7 314 aaPredicted RBP12.11□□□□□ -0.47
SMAD6-203ENST00000558937 A0A087X0M5 115 aa12.1□□□□□ -0.47
SMAD6-203ENST00000558937 TRAV24A0A0B4J272 114 aa12.1□□□□□ -0.47
SMAD6-203ENST00000558937 A0A1B0GX30 115 aa12.1□□□□□ -0.47
SMAD6-203ENST00000558937 IRGMA1A4Y4 181 aa12.1□□□□□ -0.47
SMAD6-203ENST00000558937 LEUTXA8MZ59 168 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms