RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	OR14J1	Q9UGF5	321 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	NUFIP1	Q9UHK0	495 aa	Known RBP	5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	CLEC2D	Q9UHP7	191 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	MRM2	Q9UI43	246 aa	Known RBP	5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	ENPP5	Q9UJA9	477 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	GNG8	Q9UK08	70 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	OR52A1	Q9UKL2	312 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	SLC22A13	Q9Y226	551 aa		5.68	□□□□□ -1.5
MARK3-215	ENST00000558787	NOTCH3	Q9UM47	2321 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	PQLC2L	A1A4F0	135 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	OR5B21	A6NL26	309 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	LOC110117498-PIK3R3	F6TDL0	507 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787		J3QLW9	94 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	TIMM23	O14925	209 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	DHRS3	O75911	302 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	TSPAN9	O75954	239 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	NXPH2	O95156	264 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	PGA5	P0DJD9	388 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	SMIM18	P0DKX4	95 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF19	P17023	458 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	GABRA5	P31644	462 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	TGFBR2	P37173	567 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	MAP2K4	P45985	399 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	BMX	P51813	675 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	GBX2	P52951	348 aa	Predicted RBP	5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	OR12D2	P58182	307 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	RPL15	P61313	204 aa	Known RBP	5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	RPL31	P62899	125 aa	Known RBP	5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	ACSM1	Q08AH1	577 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF273	Q14593	569 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	SPHAR	Q15513	63 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	MED22	Q15528	200 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF829	Q3KNS6	432 aa	Predicted RBP	5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	CLVS2	Q5SYC1	327 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	BCL2L15	Q5TBC7	163 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	NCR3LG1	Q68D85	454 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	LHFPL4	Q7Z7J7	247 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	CALHM1	Q8IU99	346 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	ELMOD2	Q8IZ81	293 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	LYG1	Q8N1E2	194 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	DYNAP	Q8N1N2	210 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	YIPF7	Q8N8F6	280 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	POC1A	Q8NBT0	407 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	BEND2	Q8NDZ0	799 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	OR14K1	Q8NGZ2	314 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	TRMT10A	Q8TBZ6	339 aa	Known RBP	5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	MUL1	Q969V5	352 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	NRIP2	Q9BQI9	281 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF649	Q9BS31	505 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	MMP27	Q9H306	513 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	MOB1A	Q9H8S9	216 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	RASL12	Q9NYN1	266 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	FOXJ3	Q9UPW0	622 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	LSM2	Q9Y333	95 aa	Known RBP	5.67	□□□□□ -1.5
MARK3-215	ENST00000558787		R4GMQ9	66 aa		5.67	□□□□□ -1.5
MARK3-215	ENST00000558787	TRBV23-1	A0A0A0MS06	115 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	FAM230A	A0A1W2PPH8	454 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787		J3QT63	122 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	CHST1	O43916	411 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	CALCB	P10092	127 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	PSMB9	P28065	219 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	RPL5	P46777	297 aa	Known RBP	5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	CCR9	P51686	369 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	MLLT11	Q13015	90 aa	Predicted RBP	5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	GPR50	Q13585	617 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	HABP2	Q14520	560 aa	Predicted RBP	5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	UBE2V2	Q15819	145 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	NEDD8	Q15843	81 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	SMIM21	Q3B7S5	101 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	TP53I3	Q53FA7	332 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	SYT6	Q5T7P8	510 aa	Predicted RBP	5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	TMEM42	Q69YG0	159 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	XAF1	Q6GPH4	301 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	RPL22L1	Q6P5R6	122 aa	Known RBP	5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	CRIP3	Q6Q6R5	217 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF573	Q86YE8	665 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	RDH10	Q8IZV5	341 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	ZNF485	Q8NCK3	441 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	OR5D13	Q8NGL4	314 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	OR5R1	Q8NH85	324 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	PIFO	Q8TCI5	191 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	UFD1	Q92890	307 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	PELI1	Q96FA3	418 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	MGLL	Q99685	303 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	NKX3-1	Q99801	234 aa	Predicted RBP	5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	ISG20L2	Q9H9L3	353 aa	Known RBP	5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	IL36RN	Q9UBH0	155 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787		V9GYS6	101 aa		5.66	□□□□□ -1.5
MARK3-215	ENST00000558787	IGKV1-27	A0A075B6S5	117 aa		5.65	□□□□□ -1.5
MARK3-215	ENST00000558787	TMEM212	A6NML5	194 aa		5.65	□□□□□ -1.5
MARK3-215	ENST00000558787		G3V4G9	280 aa		5.65	□□□□□ -1.5
MARK3-215	ENST00000558787	CCRL2	O00421	344 aa		5.65	□□□□□ -1.5
MARK3-215	ENST00000558787	NOS1AP	O75052	506 aa	Predicted RBP	5.65	□□□□□ -1.5
MARK3-215	ENST00000558787	PRB2	P02812	416 aa	Predicted RBP	5.65	□□□□□ -1.5
MARK3-215	ENST00000558787	TK1	P04183	234 aa		5.65	□□□□□ -1.5
MARK3-215	ENST00000558787	CD1A	P06126	327 aa		5.65	□□□□□ -1.5
MARK3-215	ENST00000558787	CSF1	P09603	554 aa		5.65	□□□□□ -1.5
MARK3-215	ENST00000558787	HSMCR30	P0CW71	290 aa		5.65	□□□□□ -1.5
MARK3-215	ENST00000558787	VSIG10L2	P0DP72	767 aa		5.65	□□□□□ -1.5

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