RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 A0A1W2PP11 408 aa10.14□□□□□ -0.79
SMAD3-205ENST00000558428 MEX3AA1L020 520 aaKnown RBP10.14□□□□□ -0.79
SMAD3-205ENST00000558428 HSPB6O14558 160 aa10.14□□□□□ -0.79
SMAD3-205ENST00000558428 IGHV1-69P01742 117 aa10.14□□□□□ -0.79
SMAD3-205ENST00000558428 GTF2F2P13984 249 aa10.14□□□□□ -0.79
SMAD3-205ENST00000558428 CCL3L1P16619 93 aa10.14□□□□□ -0.79
SMAD3-205ENST00000558428 CALRP27797 417 aaKnown RBP10.14□□□□□ -0.79
SMAD3-205ENST00000558428 RBM11P57052 281 aaKnown RBP10.14□□□□□ -0.79
SMAD3-205ENST00000558428 BPIFB3P59826 476 aa10.14□□□□□ -0.79
SMAD3-205ENST00000558428 PRB3Q04118 309 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-205ENST00000558428 KLRD1Q13241 179 aa10.14□□□□□ -0.79
SMAD3-205ENST00000558428 PAN3Q58A45 887 aaKnown RBP10.14□□□□□ -0.79
SMAD3-205ENST00000558428 NHLRC3Q5JS37 347 aa10.14□□□□□ -0.79
SMAD3-205ENST00000558428 C9orf139Q6ZV77 190 aa10.14□□□□□ -0.79
SMAD3-205ENST00000558428 SOX21Q9Y651 276 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-205ENST00000558428 A0A0A6YYJ9 748 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 TRAV24A0A0B4J272 114 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 hCG_1809904A0A1W2PP81 198 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 A0A1W2PPE2 198 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 A0A1W2PR64 198 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 A0A1W2PRV1 198 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 hADV38S2A0JD32 116 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 FUOMA2VDF0 154 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 RNASEK-C17orf49H0YIS7 233 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 GEMIN2O14893 280 aaKnown RBP10.13□□□□□ -0.79
SMAD3-205ENST00000558428 OR7C1O76099 320 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-205ENST00000558428 TNFAIP8O95379 198 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 CSN2P05814 226 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 PRTN3P24158 256 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 ERP29P30040 261 aaKnown RBP10.13□□□□□ -0.79
SMAD3-205ENST00000558428 P2RX3P56373 397 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 GUCA2AQ02747 115 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 MEF2CQ06413 473 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-205ENST00000558428 AESQ08117 197 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 ATXN7L3Q14CW9 347 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-205ENST00000558428 NEDD8Q15843 81 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 KRBOX4Q5JUW0 171 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 NCR3LG1Q68D85 454 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 METAP1DQ6UB28 335 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-205ENST00000558428 RBMS3Q6XE24 437 aaKnown RBP10.13□□□□□ -0.79
SMAD3-205ENST00000558428 USP43Q70EL4 1123 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 TRAPPC6BQ86SZ2 158 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 LINC00596Q86U02 117 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 SIGLECL1Q8N7X8 197 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 TNFRSF14Q92956 283 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 C1orf147Q96MC9 270 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-205ENST00000558428 BANF2Q9H503 90 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 UNKLQ9H9P5 680 aaKnown RBP10.13□□□□□ -0.79
SMAD3-205ENST00000558428 ING3Q9NXR8 418 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 AK6Q9Y3D8 172 aaKnown RBP10.13□□□□□ -0.79
SMAD3-205ENST00000558428 LINC00312Q9Y6C7 94 aa10.13□□□□□ -0.79
SMAD3-205ENST00000558428 FBN1P35555 2871 aaKnown RBP10.12□□□□□ -0.79
SMAD3-205ENST00000558428 TRDV1A0A1B0GX56 115 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 A0A1W2PRD5 423 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 A0A1W2PRF3 423 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 A0A1W2PRM7 423 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 CRTAPO75718 401 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-205ENST00000558428 VENTXO95231 258 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 ZNF728P0DKX0 622 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 HTR2CP28335 458 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 GLIPR1P48060 266 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 HILS1P60008 231 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 ERVFRD-1P60508 538 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 TAF9Q16594 264 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 MPV17LQ2QL34 196 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 C1orf100Q5SVJ3 147 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 ATAD3CQ5T2N8 411 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 CD200R1LQ6Q8B3 271 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 TCF23Q7RTU1 214 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 MRPS24Q96EL2 167 aaKnown RBP10.12□□□□□ -0.79
SMAD3-205ENST00000558428 COQ2Q96H96 371 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 ZNF48Q96MX3 618 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-205ENST00000558428 ZNF714Q96N38 554 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 JMJD8Q96S16 334 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 PLGRKTQ9HBL7 147 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 ZNF581Q9P0T4 197 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 GHRLQ9UBU3 117 aa10.12□□□□□ -0.79
SMAD3-205ENST00000558428 A0A087WXM4 84 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 TRGV10A0A0A0MS01 117 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 MDFIC2A0A1B0GVS7 189 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 C17orf98A8MV24 154 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 UBBP0CG47 229 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 MGMTP16455 207 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 GALP22466 123 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 MYL9P24844 172 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 KCNJ3P48549 501 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 UBE2E1P51965 193 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 DLX6P56179 175 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 TUSC1Q2TAM9 212 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 DEFB112Q30KQ8 113 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 C22orf42Q6IC83 251 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 ZNF782Q6ZMW2 699 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-205ENST00000558428 C11orf42Q8N5U0 333 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 SUMF2Q8NBJ7 301 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 TMEM104Q8NE00 496 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 TSPAN14Q8NG11 270 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 OR6M1Q8NGM8 313 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 ZDHHC16Q969W1 377 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 FAM46BQ96A09 425 aa10.11□□□□□ -0.79
SMAD3-205ENST00000558428 GFI1Q99684 422 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms