RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 YIPF5Q969M3 257 aa10.39□□□□□ -0.75
TPM1-209ENST00000558072 ARHGAP5-AS1Q96IT6 56 aa10.39□□□□□ -0.75
TPM1-209ENST00000558072 CMSS1Q9BQ75 279 aaKnown RBP10.39□□□□□ -0.75
TPM1-209ENST00000558072 NICN1Q9BSH3 213 aa10.39□□□□□ -0.75
TPM1-209ENST00000558072 WDR13Q9H1Z4 485 aa10.39□□□□□ -0.75
TPM1-209ENST00000558072 KCNK15Q9H427 330 aa10.39□□□□□ -0.75
TPM1-209ENST00000558072 TMEM165Q9HC07 324 aa10.39□□□□□ -0.75
TPM1-209ENST00000558072 PALMDQ9NP74 551 aa10.39□□□□□ -0.75
TPM1-209ENST00000558072 DCAF16Q9NXF7 216 aa10.39□□□□□ -0.75
TPM1-209ENST00000558072 PCDHB10Q9UN67 800 aa10.39□□□□□ -0.75
TPM1-209ENST00000558072 CHD3Q12873 2000 aaKnown RBP10.38□□□□□ -0.75
TPM1-209ENST00000558072 TANC2Q9HCD6 1990 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 IGKV1D-17A0A075B6S4 117 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 NBPF19A0A087WUL8 3843 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 A0A0G2JMP0 313 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 A0A0X1KG70 313 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 ISPDA4D126 451 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 LYNX1G3V0Z9 82 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.38□□□□□ -0.75
TPM1-209ENST00000558072 SLC33A1O00400 549 aaPredicted RBP10.38□□□□□ -0.75
TPM1-209ENST00000558072 SSX4O60224 188 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 IGHV2-70P01814 119 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 HLA-DQB1P01920 261 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 LYNX1P0DP58 116 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 GNB3P16520 340 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 ERP29P30040 261 aaKnown RBP10.38□□□□□ -0.75
TPM1-209ENST00000558072 TMEM50BP56557 158 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 COL10A1Q03692 680 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 CARTPTQ16568 116 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 DEFB113Q30KQ7 82 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 TRIQKQ629K1 86 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 SFRP4Q6FHJ7 346 aaPredicted RBP10.38□□□□□ -0.75
TPM1-209ENST00000558072 PRSS57Q6UWY2 283 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 GDPD3Q7L5L3 318 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 ZNF554Q86TJ5 538 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 SNX29P2Q8IUI4 249 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 BATF2Q8N1L9 274 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 ASCC1Q8N9N2 400 aaKnown RBP10.38□□□□□ -0.75
TPM1-209ENST00000558072 C19orf18Q8NEA5 215 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 DEFB108BQ8NET1 73 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 OR4M2Q8NGB6 313 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 SMIM4Q8WVI0 70 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 ST8SIA4Q92187 359 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 RAB39BQ96DA2 213 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 C12orf4Q9NQ89 552 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 IFT46Q9NQC8 304 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 ETAA1Q9NY74 926 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 CACNG2Q9Y698 323 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 V9GYH0 126 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 CRYBG3Q68DQ2 2970 aa10.38□□□□□ -0.75
TPM1-209ENST00000558072 LRBAP50851 2863 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 A0A0A6YYD4 124 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 TRBV6-6A0A0A6YYG2 114 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 TRAV24A0A0B4J272 114 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 KIR2DS1A0A191URI9 304 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 A0A1W2PPH5 198 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 TMEM30CPA0ZSE6 113 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 K7N7A8 449 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 SIRPB1O00241 398 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 TMPRSS2O15393 492 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 ADAM20O43506 726 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 IGHV4-39P01824 125 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 GYPAP02724 150 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 INHBBP09529 407 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 CSF1P09603 554 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 SLC25A16P16260 332 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 DUSP1P28562 367 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 RCVRNP35243 200 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 FAUP35544 74 aaKnown RBP10.37□□□□□ -0.75
TPM1-209ENST00000558072 KIR2DS4P43632 304 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 PLA2G7Q13093 441 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 KIR2DS1Q14954 304 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 ZMYND11Q15326 602 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 GRK1Q15835 563 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 MOGAT2Q3SYC2 334 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 ACTBL2Q562R1 376 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 PLAC9Q5JTB6 97 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 SIGIRRQ6IA17 410 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 SLC35E4Q6ICL7 350 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 C6orf201Q7Z4U5 140 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 OR8H2Q8N162 312 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 MFSD4AQ8N468 514 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 ZNF565Q8N9K5 539 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 OR8B3Q8NGG8 313 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 NEIL1Q96FI4 390 aaPredicted RBP10.37□□□□□ -0.75
TPM1-209ENST00000558072 LURAP1Q96LR2 239 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 DMRTB1Q96MA1 342 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 OR8B2Q96RD0 313 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 OCSTAMPQ9BR26 566 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 FAAP24Q9BTP7 215 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 SRRQ9GZT4 340 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 CHMP1AQ9HD42 196 aaPredicted RBP10.37□□□□□ -0.75
TPM1-209ENST00000558072 KCNIP1Q9NZI2 227 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 OR6C3Q9NZP0 311 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 ZNF222Q9UK12 451 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 HECTD1Q9ULT8 2610 aa10.37□□□□□ -0.75
TPM1-209ENST00000558072 IGHV3OR15-7A0A075B7D8 119 aa10.36□□□□□ -0.75
TPM1-209ENST00000558072 TMEM235A6NFC5 223 aa10.36□□□□□ -0.75
TPM1-209ENST00000558072 CENPXA8MT69 81 aa10.36□□□□□ -0.75
TPM1-209ENST00000558072 TK1P04183 234 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms