RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 BOLA2-SMG1P6H3BVE0 249 aa17.19■□□□□ 0.34
SNRPA1-205ENST00000558036 SLC33A1O00400 549 aaPredicted RBP17.19■□□□□ 0.34
SNRPA1-205ENST00000558036 HAND1O96004 215 aa17.19■□□□□ 0.34
SNRPA1-205ENST00000558036 LILRB1Q8NHL6 650 aaPredicted RBP17.19■□□□□ 0.34
SNRPA1-205ENST00000558036 PRRT1Q99946 306 aa17.19■□□□□ 0.34
SNRPA1-205ENST00000558036 CHST6Q9GZX3 395 aa17.19■□□□□ 0.34
SNRPA1-205ENST00000558036 SPACA1Q9HBV2 294 aa17.19■□□□□ 0.34
SNRPA1-205ENST00000558036 ETAA1Q9NY74 926 aa17.19■□□□□ 0.34
SNRPA1-205ENST00000558036 CHD3Q12873 2000 aaKnown RBP17.19■□□□□ 0.34
SNRPA1-205ENST00000558036 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 ARPC4P59998 168 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 PAN3Q58A45 887 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 SPIN3Q5JUX0 258 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 VAX1Q5SQQ9 334 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 FAM201AQ5SY85 155 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 C20orf204Q6ZNR8 217 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 C17orf107Q6ZR85 190 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 GCSAMQ8N6F7 178 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 PPA2Q9H2U2 334 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 GHITMQ9H3K2 345 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 FN3KRPQ9HA64 309 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 GCM1Q9NP62 436 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 CISD1Q9NZ45 108 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 IL19Q9UHD0 177 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 RALYQ9UKM9 306 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 M0R233 179 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 SH2D1BO14796 132 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 HPXP02790 462 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 TAS2R46P59540 309 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 TSPAN5P62079 268 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 SEC22CQ9BRL7 303 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 IFT22Q9H7X7 185 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 SLC2A8Q9NY64 477 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 DCHS2Q6V1P9 2916 aa17.18■□□□□ 0.34
SNRPA1-205ENST00000558036 CACNA1DQ01668 2161 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 ZNF462Q96JM2 2506 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 IGHV3OR15-7A0A075B7D8 119 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 RFPL4AA6NLU0 287 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 C17orf100A8MU93 164 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 RFPL4AL1F8VTS6 287 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 NAPSAO96009 420 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 HNRNPCP07910 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 RAG2P55895 527 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 ATXN7L3Q14CW9 347 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 ACTBL2Q562R1 376 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 OVCH2Q7RTZ1 564 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 TMED4Q7Z7H5 227 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 AKAP14Q86UN6 197 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 METRNQ9UJH8 293 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 EDARQ9UNE0 448 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 C7orf66A4D0T2 115 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 SRRM5B3KS81 715 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 B8ZZF3 427 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 TPD52L2O43399 206 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 PSPNO60542 156 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 VSIG10L2P0DP72 767 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 TNFSF4P23510 183 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 LOXP28300 417 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 SMIM21Q3B7S5 101 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 FIP1L1Q6UN15 594 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 ZNF554Q86TJ5 538 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 CAPSLQ8WWF8 208 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 VSIG4Q9Y279 399 aa17.17■□□□□ 0.34
SNRPA1-205ENST00000558036 VSTM5A8MXK1 200 aa17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 APOBEC3AP31941 199 aaPredicted RBP17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 GATA4P43694 442 aa17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 NPY4RP50391 375 aa17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 ATPAF1Q5TC12 328 aaPredicted RBP17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 ZNF808Q8N4W9 903 aaPredicted RBP17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 OR52B4Q8NGK2 314 aa17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 PLPPR1Q8TBJ4 325 aa17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 CHAC2Q8WUX2 184 aa17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 SLC25A21Q9BQT8 299 aaPredicted RBP17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 TMPRSS13Q9BYE2 586 aa17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 DCAF16Q9NXF7 216 aa17.16■□□□□ 0.34
SNRPA1-205ENST00000558036 TRAV39A0A0B4J263 110 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 TMEM82A0PJX8 343 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 C19orf84I3L1E1 186 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 CYB5R3P00387 301 aaPredicted RBP17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 CDK10Q15131 360 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 MST1LQ2TV78 715 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 MRPL30Q8TCC3 161 aaKnown RBP17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 OR51J1Q9H342 316 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 ZNF286AQ9HBT8 521 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 TMEM165Q9HC07 324 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 HCFC1P51610 2035 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 HMX3A6NHT5 357 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 CCNKO75909 580 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 GSTT2P0CG29 244 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 RBM39Q14498 530 aaKnown RBP17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 ARRDC1Q8N5I2 433 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 TERB2Q8NHR7 220 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 MARCH1Q8TCQ1 289 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 CCDC107Q8WV48 283 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 LIME1Q9H400 295 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 PPP1R3CQ9UQK1 317 aa17.15■□□□□ 0.34
SNRPA1-205ENST00000558036 H3BUI4 141 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 KNG1P01042 644 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 RCC1P18754 421 aaPredicted RBP17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 BAMBIQ13145 260 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms