RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 RPSAP08865 295 aaKnown RBP11.74□□□□□ -0.53
SHMT2-235ENST00000557740 TMEM225BP0DP42 221 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 DBTP11182 482 aaKnown RBP11.74□□□□□ -0.53
SHMT2-235ENST00000557740 CEACAM3P40198 252 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 ATXN7L3Q14CW9 347 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-235ENST00000557740 KRBOX4Q5JUW0 171 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 BAIAP2L2Q6UXY1 529 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 C16orf82Q7Z2V1 217 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 RNF144BQ7Z419 303 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 REC114Q7Z4M0 266 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 LHFPL3Q86UP9 236 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 SYS1Q8N2H4 156 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 OR5D14Q8NGL3 314 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 WIPF2Q8TF74 440 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-235ENST00000557740 CORO2AQ92828 525 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 STMN2Q93045 179 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 CREB3L1Q96BA8 519 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 CPNE2Q96FN4 548 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-235ENST00000557740 LIN7BQ9HAP6 207 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-235ENST00000557740 AASSQ9UDR5 926 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 DHDHQ9UQ10 334 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 MYRFQ9Y2G1 1151 aa11.74□□□□□ -0.53
SHMT2-235ENST00000557740 A0A1W2PRX2 142 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 SLC33A1O00400 549 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-235ENST00000557740 TOR1AO14656 332 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 DEGS1O15121 323 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 MPZL2O60487 215 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 PRB2P02812 416 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-235ENST00000557740 CCDC159P0C7I6 412 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 LMO1P25800 156 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 MRPL28Q13084 256 aaKnown RBP11.73□□□□□ -0.53
SHMT2-235ENST00000557740 RBM39Q14498 530 aaKnown RBP11.73□□□□□ -0.53
SHMT2-235ENST00000557740 LPCAT4Q643R3 524 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 Q6ZS46 218 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 SERPINA12Q8IW75 414 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 OR5AK2Q8NH90 309 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 DSCAML1Q8TD84 2053 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 COQ2Q96H96 371 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 Q96MT0 163 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 ISG20L2Q9H9L3 353 aaKnown RBP11.73□□□□□ -0.53
SHMT2-235ENST00000557740 ZNF286AQ9HBT8 521 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 INPP5EQ9NRR6 644 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 OR6C3Q9NZP0 311 aa11.73□□□□□ -0.53
SHMT2-235ENST00000557740 ZNF729A6NN14 1252 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-235ENST00000557740 ADARB2-AS1A8MUL3 147 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 E9PQ18 207 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 HSPB6O14558 160 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 ZFPL1O95159 310 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 CD24P25063 80 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 CD34P28906 385 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 GDNFP39905 211 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 GLP1RP43220 463 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 OR3A4PP47883 348 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 MTNR1BP49286 362 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 GBX2P52951 348 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-235ENST00000557740 PRRX1P54821 245 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 ZP1P60852 638 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 RAB40BQ12829 278 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 KISS1Q15726 138 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 HLA-DRB5Q30154 266 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 ZNF691Q5VV52 312 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 Q6P435 159 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 CCDC121Q6ZUS5 278 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 C10orf67Q8IYJ2 551 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 OR5AU1Q8NGC0 362 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 OCSTAMPQ9BR26 566 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 SLC25A33Q9BSK2 321 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 C9orf16Q9BUW7 83 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 AMBNQ9NP70 447 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 ERVK13-1Q9NX77 482 aa11.72□□□□□ -0.53
SHMT2-235ENST00000557740 H0YJX3 145 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 PIN1P1O15428 100 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 MAGEB3O15480 346 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 OR2F2O95006 317 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 ALX3O95076 343 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 IGLV1-47P01700 117 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 GABRB1P18505 474 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 RAB3AP20336 220 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 NFYBP25208 207 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 MNDAP41218 407 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 CDK5R1Q15078 307 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 PAN3Q58A45 887 aaKnown RBP11.71□□□□□ -0.53
SHMT2-235ENST00000557740 OXLD1Q5BKU9 147 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 TPTE2P1Q5T6R2 138 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 CCDC144NLQ6NUI1 221 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 PARP16Q8N5Y8 322 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 HAVCR2Q8TDQ0 301 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 SGCDQ92629 289 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 NR1H4Q96RI1 486 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-235ENST00000557740 GPER1Q99527 375 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 PDCD1LG2Q9BQ51 273 aa11.71□□□□□ -0.53
SHMT2-235ENST00000557740 PPIL3Q9H2H8 161 aaKnown RBP11.71□□□□□ -0.53
SHMT2-235ENST00000557740 PLXNB1O43157 2135 aa11.71□□□□□ -0.54
SHMT2-235ENST00000557740 KBTBD11-OT1A0A1B0GTJ5 212 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 E9PI62 339 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 BUB1B-PAK6H3BSN5 160 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 LPLP06858 475 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 PF4V1P10720 104 aa11.7□□□□□ -0.54
SHMT2-235ENST00000557740 ZSCAN26Q16670 478 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms