RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FPR2P25090 351 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 SRP14P37108 136 aaKnown RBP11.3□□□□□ -0.6
SHMT2-234ENST00000557703 SCAND1P57086 179 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 GRK1Q15835 563 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 RAB11BQ15907 218 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 C22orf42Q6IC83 251 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 Q71RC1 249 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-234ENST00000557703 ZNF565Q8N9K5 539 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 PTX4Q96A99 478 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 C1orf147Q96MC9 270 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-234ENST00000557703 URM1Q9BTM9 101 aaKnown RBP11.3□□□□□ -0.6
SHMT2-234ENST00000557703 STEAP1Q9UHE8 339 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 LINC00312Q9Y6C7 94 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 A0A0A6YYJ9 748 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 TMEM82A0PJX8 343 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 IFITM5A6NNB3 132 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 POM121CA8CG34 1229 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 NOTOA8MTQ0 251 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 AIPO00170 330 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 SLC33A1O00400 549 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-234ENST00000557703 PSPNO60542 156 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 CRTAPO75718 401 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-234ENST00000557703 OR7C1O76099 320 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-234ENST00000557703 TOX4O94842 621 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 FSHBP01225 129 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 MMP9P14780 707 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 MGMTP16455 207 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 NCR3LG1Q68D85 454 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 OR13F1Q8NGS4 319 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 CORO2AQ92828 525 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 YIPF6Q96EC8 236 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 Q96M66 194 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 TM2D1Q9BX74 207 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 TAS2R3Q9NYW6 316 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 OR6C3Q9NZP0 311 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 METRNQ9UJH8 293 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 NUP50Q9UKX7 468 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 UBE2J1Q9Y385 318 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-234ENST00000557703 AK6Q9Y3D8 172 aaKnown RBP11.29□□□□□ -0.6
SHMT2-234ENST00000557703 SVEP1Q4LDE5 3571 aa11.29□□□□□ -0.6
SHMT2-234ENST00000557703 A0A1B0GW55 424 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 TMEM14DPA8MWL7 114 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 DUX4L2P0CJ85 424 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 DUX4L3P0CJ86 424 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 DUX4L4P0CJ87 422 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 DUX4L5P0CJ88 424 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 DUX4L6P0CJ89 424 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 DUX4L7P0CJ90 424 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 SELLP14151 372 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 FUT3P21217 361 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 PRTN3P24158 256 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 DUSP1P28562 367 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 OR3A1P47881 315 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 CEBPDP49716 269 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-234ENST00000557703 P2RX3P56373 397 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 RPS27AP62979 156 aaKnown RBP11.28□□□□□ -0.6
SHMT2-234ENST00000557703 PAN3Q58A45 887 aaKnown RBP11.28□□□□□ -0.6
SHMT2-234ENST00000557703 GPR157Q5UAW9 335 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 DUX4L9Q6RFH8 374 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-234ENST00000557703 C9orf139Q6ZV77 190 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 OR10K1Q8NGX5 313 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 SLC25A28Q96A46 364 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 FAM3DQ96BQ1 224 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 CHCHD6Q9BRQ6 235 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 TMEM59Q9BXS4 323 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 SELENOIQ9C0D9 397 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 SIRPDQ9H106 197 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 OR51E2Q9H255 320 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 GAL3ST2Q9H3Q3 398 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 HEXA-AS1Q9H8Q6 139 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 RAB9BQ9NP90 201 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 RCC2Q9P258 522 aaKnown RBP11.28□□□□□ -0.6
SHMT2-234ENST00000557703 IL36RNQ9UBH0 155 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 DUX4Q9UBX2 424 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 NF1P21359 2839 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 DSCAML1Q8TD84 2053 aa11.28□□□□□ -0.6
SHMT2-234ENST00000557703 TRGV10A0A0A0MS01 117 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 TRAV24A0A0B4J272 114 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 MCRIP1C9JLW8 97 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 SIRPB1O00241 398 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 GEMIN2O14893 280 aaKnown RBP11.27□□□□□ -0.61
SHMT2-234ENST00000557703 AIREO43918 545 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 SCGNO76038 276 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 ZNF728P0DKX0 622 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 RAB6AP20340 208 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 GZMHP20718 246 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 GADD45AP24522 165 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 EDDM3BP56851 147 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 ARF6P62330 175 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 QRFPP83859 136 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 SCN1BQ07699 218 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 ARL6IP1Q15041 203 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 PIGYQ3MUY2 71 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 TMEM200BQ69YZ2 307 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 SLC35E4Q6ICL7 350 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 C1orf229Q6ZS94 237 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-234ENST00000557703 USP43Q70EL4 1123 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 ZNF554Q86TJ5 538 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms