RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 FBP1P09467 338 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 GTF2F2P13984 249 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 MMP9P14780 707 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 PRTN3P24158 256 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 ERP29P30040 261 aaKnown RBP6.85□□□□□ -1.31
PSEN1-223ENST00000557511 MLLT11Q13015 90 aaPredicted RBP6.85□□□□□ -1.31
PSEN1-223ENST00000557511 IL13RA2Q14627 380 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 PAN3Q58A45 887 aaKnown RBP6.85□□□□□ -1.31
PSEN1-223ENST00000557511 LIPKQ5VXJ0 399 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 TMEM200BQ69YZ2 307 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 AWAT2Q6E213 333 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 ELP2Q6IA86 826 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF529Q6P280 563 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF367Q7RTV3 350 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 LINC00596Q86U02 117 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 OSR2Q8N2R0 312 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 FGFRL1Q8N441 504 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 OR13D1Q8NGV5 346 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 NEK7Q8TDX7 302 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 PHYHIPQ92561 330 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 SLC25A28Q96A46 364 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF714Q96N38 554 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 DERL3Q96Q80 235 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 OR5M11Q96RB7 305 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 MGLLQ99685 303 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 BARHL1Q9BZE3 327 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 CHST6Q9GZX3 395 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 GAL3ST2Q9H3Q3 398 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 SPACA1Q9HBV2 294 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 C19orf12Q9NSK7 152 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 ST3GAL6Q9Y274 331 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 MRPS28Q9Y2Q9 187 aaKnown RBP6.85□□□□□ -1.31
PSEN1-223ENST00000557511 ABCA2Q9BZC7 2435 aa6.85□□□□□ -1.31
PSEN1-223ENST00000557511 NAV3Q8IVL0 2385 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 ZFHX3Q15911 3703 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 JMJD1CQ15652 2540 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 TRBV5-7A0A0A0MS05 114 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 IGKV1-12A0A0C4DH73 117 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 A0A1W2PRD5 423 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 A0A1W2PRF3 423 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 A0A1W2PRM7 423 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 MEIOCA2RUB1 952 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 RRP9O43818 475 aaKnown RBP6.84□□□□□ -1.31
PSEN1-223ENST00000557511 OR7C1O76099 320 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-223ENST00000557511 CDRT1O95170 752 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 VENTXO95231 258 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 IGKV1D-12P01611 117 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 UBBP0CG47 229 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 ZNF728P0DKX0 622 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 IGFBP3P17936 291 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-223ENST00000557511 SERPINA2P20848 420 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 OR3A4PP47883 348 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 KCNJ3P48549 501 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 UBE2E1P51965 193 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 P2RX3P56373 397 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 ZP1P60852 638 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 RPS11P62280 158 aaKnown RBP eCLIP6.84□□□□□ -1.31
PSEN1-223ENST00000557511 TPBGQ13641 420 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 IRF3Q14653 427 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 TBCEQ15813 527 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-223ENST00000557511 SLC22A6Q4U2R8 563 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 KRBOX4Q5JUW0 171 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 ATAD3CQ5T2N8 411 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 RUSC1-AS1Q66K80 236 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 OR52W1Q6IF63 320 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 METAP1DQ6UB28 335 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-223ENST00000557511 GLIPR1L1Q6UWM5 242 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 BCL6BQ8N143 479 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-223ENST00000557511 OR10K1Q8NGX5 313 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 FCGR1BQ92637 280 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 GCDHQ92947 438 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-223ENST00000557511 TMEM203Q969S6 136 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 MUL1Q969V5 352 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 MRPS24Q96EL2 167 aaKnown RBP6.84□□□□□ -1.31
PSEN1-223ENST00000557511 UQCC2Q9BRT2 126 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 C19orf24Q9BVV8 132 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 CST11Q9H112 138 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 PPA2Q9H2U2 334 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 DPAGT1Q9H3H5 408 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 ACOT13Q9NPJ3 140 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 ING3Q9NXR8 418 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 IL36GQ9NZH8 169 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 OR6C3Q9NZP0 311 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 IL36RNQ9UBH0 155 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 GHRLQ9UBU3 117 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 LINC00312Q9Y6C7 94 aa6.84□□□□□ -1.31
PSEN1-223ENST00000557511 TRAV8-7A0A075B6U6 113 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 A0A0G2JK05 382 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 TMEM82A0PJX8 343 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 HSPB6O14558 160 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 PDCD5O14737 125 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 NPFFO15130 113 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 ZNF737O75373 536 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 CRTAPO75718 401 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-223ENST00000557511 RBP4P02753 201 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 CCL3L1P16619 93 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 CPEP16870 476 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 SRMP19623 302 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 COX7A1P24310 79 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 MYL9P24844 172 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms