RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ESPL1Q14674 2120 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 LAMTOR5O43504 91 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 TNFSF12O43508 249 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 GNRHRP30968 328 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 DUSP3P51452 185 aaPredicted RBP15.23■□□□□ 0.03
XRCC3-218ENST00000557439 POLR2GP62487 172 aaKnown RBP eCLIP15.23■□□□□ 0.03
XRCC3-218ENST00000557439 PRDX4Q13162 271 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 LGI3Q8N145 548 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 CLCC1Q96S66 551 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 ABHD14AQ9BUJ0 271 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 SUCNR1Q9BXA5 334 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 PLEKHA2Q9HB19 425 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 IGKV1D-13A0A0B4J2D9 117 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 LILRA1O75019 489 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 PRH1P02810 166 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 IGKV1-13P0DP09 117 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 TMEM182Q6ZP80 229 aaPredicted RBP15.23■□□□□ 0.03
XRCC3-218ENST00000557439 ISOC2Q96AB3 205 aa15.23■□□□□ 0.03
XRCC3-218ENST00000557439 C3orf85A0A1B0GTC6 90 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 CER1O95813 267 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 CAMLGP49069 296 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 RAB13P51153 203 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 DVL1P1P54792 670 aaPredicted RBP15.22■□□□□ 0.03
XRCC3-218ENST00000557439 PCBD1P61457 104 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 NEK7Q8TDX7 302 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 IP6K3Q96PC2 410 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 C1QTNF5Q9BXJ0 243 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 CACFD1Q9UGQ2 172 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 MPPED1O15442 326 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 ST8SIA3O43173 380 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 SYNGR1O43759 233 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 GPR137BO60478 399 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 PPP1CCP36873 323 aaKnown RBP15.22■□□□□ 0.03
XRCC3-218ENST00000557439 HERPUD1Q15011 391 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 PEA15Q15121 130 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 RIPPLY2Q5TAB7 128 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 C6orf15Q6UXA7 325 aaPredicted RBP15.22■□□□□ 0.03
XRCC3-218ENST00000557439 ZNF818PQ6ZRF7 136 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 TBC1D26Q86UD7 250 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 ZNF100Q8IYN0 542 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 CPNE4Q96A23 557 aaPredicted RBP15.22■□□□□ 0.03
XRCC3-218ENST00000557439 C14orf79Q96F83 325 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 RSRP1Q9BUV0 290 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 EIF5A2Q9GZV4 153 aaKnown RBP15.22■□□□□ 0.03
XRCC3-218ENST00000557439 ZNF552Q9H707 407 aaPredicted RBP15.22■□□□□ 0.03
XRCC3-218ENST00000557439 RPS10P5Q9NQ39 176 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 FAM212BQ9NTI7 297 aaPredicted RBP15.22■□□□□ 0.03
XRCC3-218ENST00000557439 MTCH1Q9NZJ7 389 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 FBXO7Q9Y3I1 522 aa15.22■□□□□ 0.03
XRCC3-218ENST00000557439 HSD17B6O14756 317 aa15.21■□□□□ 0.03
XRCC3-218ENST00000557439 GLAP06280 429 aa15.21■□□□□ 0.03
XRCC3-218ENST00000557439 SNRNP70P08621 437 aaKnown RBP15.21■□□□□ 0.03
XRCC3-218ENST00000557439 MAGEA5P43359 124 aa15.21■□□□□ 0.03
XRCC3-218ENST00000557439 CXorf66Q5JRM2 361 aaPredicted RBP15.21■□□□□ 0.03
XRCC3-218ENST00000557439 LINC00696Q6ZRV3 163 aa15.21■□□□□ 0.03
XRCC3-218ENST00000557439 IL36GQ9NZH8 169 aa15.21■□□□□ 0.03
XRCC3-218ENST00000557439 ZNF175Q9Y473 711 aa15.21■□□□□ 0.03
XRCC3-218ENST00000557439 COLCA2A8K830 154 aa15.21■□□□□ 0.02
XRCC3-218ENST00000557439 YKT6O15498 198 aa15.21■□□□□ 0.02
XRCC3-218ENST00000557439 DANCRP0C864 163 aa15.21■□□□□ 0.02
XRCC3-218ENST00000557439 SNCAP37840 140 aa15.21■□□□□ 0.02
XRCC3-218ENST00000557439 GAPTQ8N292 157 aa15.21■□□□□ 0.02
XRCC3-218ENST00000557439 LRTM2Q8N967 370 aa15.21■□□□□ 0.02
XRCC3-218ENST00000557439 SYT3Q9BQG1 590 aa15.21■□□□□ 0.02
XRCC3-218ENST00000557439 SCRT1Q9BWW7 348 aa15.21■□□□□ 0.02
XRCC3-218ENST00000557439 RGCCQ9H4X1 137 aa15.21■□□□□ 0.02
XRCC3-218ENST00000557439 ZNF732B4DXR9 585 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 NEURL1O76050 574 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 P2RY1P47900 373 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 GUK1Q16774 197 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 C17orf78Q8N4C9 275 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 OR4D5Q8NGN0 318 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 ARV1Q9H2C2 271 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 SPACA1Q9HBV2 294 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 UBE2J1Q9Y385 318 aaPredicted RBP15.2■□□□□ 0.02
XRCC3-218ENST00000557439 DIDO1Q9BTC0 2240 aaKnown RBP15.2■□□□□ 0.02
XRCC3-218ENST00000557439 TRAV39A0A0B4J263 110 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 IGSF23A1L1A6 192 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 GPR37O15354 613 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 SSSCA1O60232 199 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 SERPINA7P05543 415 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 EWSR1Q01844 656 aaKnown RBP eCLIP15.2■□□□□ 0.027e-7■■■□□ 14.6
XRCC3-218ENST00000557439 TMEM211Q6ICI0 200 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 C20orf204Q6ZNR8 217 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 LYPD6BQ8NI32 183 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 FAM213BQ8TBF2 198 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 SPSB4Q96A44 273 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 CCL28Q9NRJ3 127 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 C19orf12Q9NSK7 152 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 FOXJ2Q9P0K8 574 aa15.2■□□□□ 0.02
XRCC3-218ENST00000557439 IGKV1-6A0A0C4DH72 117 aa15.19■□□□□ 0.02
XRCC3-218ENST00000557439 IGHV3-64DA0A0J9YX35 117 aa15.19■□□□□ 0.02
XRCC3-218ENST00000557439 PQLC2LA1A4F0 135 aa15.19■□□□□ 0.02
XRCC3-218ENST00000557439 CDRT15L2A8MXV6 281 aa15.19■□□□□ 0.02
XRCC3-218ENST00000557439 RPL36A-HNRNPH2H7BZ11 118 aa15.19■□□□□ 0.02
XRCC3-218ENST00000557439 HOXA6P31267 233 aa15.19■□□□□ 0.02
XRCC3-218ENST00000557439 LHX2P50458 406 aa15.19■□□□□ 0.02
XRCC3-218ENST00000557439 AVPI1Q5T686 147 aa15.19■□□□□ 0.02
XRCC3-218ENST00000557439 IQCF2Q8IXL9 164 aa15.19■□□□□ 0.02
XRCC3-218ENST00000557439 UBALD2Q8IYN6 164 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms