RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 LINC00299Q6ZSB3 139 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 GID4Q8IVV7 300 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 NKAIN4Q8IVV8 208 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 NRMQ8IXM6 262 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 CYP4Z2PQ8N1L4 340 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 ZNF321PQ8N8H1 164 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 OR2T33Q8NG76 320 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 OR52L1Q8NGH7 329 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 FAM81AQ8TBF8 368 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 HAVCR2Q8TDQ0 301 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 GPR119Q8TDV5 335 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 CT55Q8WUE5 264 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 APH1BQ8WW43 257 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 MYDGFQ969H8 173 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 EFHD2Q96C19 240 aaPredicted RBP2.32□□□□□ -2.04
VRK1-207ENST00000557352 DGCR14Q96DF8 476 aaKnown RBP2.32□□□□□ -2.04
VRK1-207ENST00000557352 MYCBPQ99417 103 aaPredicted RBP2.32□□□□□ -2.04
VRK1-207ENST00000557352 SLC30A2Q9BRI3 323 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 ANGPTL4Q9BY76 406 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 POTEKPQ9BYX7 375 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 SYNDIG1Q9H7V2 258 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 VCX3AQ9NNX9 186 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 ISYNA1Q9NPH2 558 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 CMC2Q9NRP2 79 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 INPP5EQ9NRR6 644 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 CLN6Q9NWW5 311 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 QPCTLQ9NXS2 382 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 SCN3BQ9NY72 215 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 PISDQ9UG56 409 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 CHRNA9Q9UGM1 479 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 WARS2Q9UGM6 360 aaKnown RBP2.32□□□□□ -2.04
VRK1-207ENST00000557352 ZNF337Q9Y3M9 751 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 RPL36Q9Y3U8 105 aaKnown RBP2.32□□□□□ -2.04
VRK1-207ENST00000557352 CACNG2Q9Y698 323 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 ATMQ13315 3056 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 TANC2Q9HCD6 1990 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 CHD8Q9HCK8 2581 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 PIEZO2Q9H5I5 2752 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 NBASA2RRP1 2371 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 CELSR3Q9NYQ7 3312 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 IGKV1D-42A0A075B6H8 117 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 TRAV36DV7A0A075B6V5 113 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 A0A1W2PNV4 684 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 LRRC30A6NM36 301 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 GJE1A6NN92 205 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 A8MUA0 341 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 EFCAB9A8MZ26 197 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 FTCDNL1E5RQL4 147 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 NPIPA7E9PJI5 369 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 H3BN98 237 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 J3QRE1 110 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 RAD1O60671 282 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 CBR3O75828 277 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 OR2J2O76002 312 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 OR7A10O76100 309 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 TNFSF15O95150 251 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 AKR7A3O95154 331 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 NDUFB2O95178 105 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 VAMP5O95183 116 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 PTBP3O95758 552 aaKnown RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 CLIC3O95833 236 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 IFNGP01579 166 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 BGLAPP02818 100 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 CDK1P06493 297 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 CD55P08174 381 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 CD14P08571 375 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 STSP08842 583 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 HTR1AP08908 422 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 UBTFL6P0CB48 400 aaPredicted RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 GKN3PP0CG01 181 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 NPIPA8P0DM63 369 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 DBTP11182 482 aaKnown RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 IFI30P13284 250 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 ZNF3P17036 446 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 SLC2A5P22732 501 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 POLR2IP36954 125 aaKnown RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 DLSTP36957 453 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 PMELP40967 661 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 PTGFRP43088 359 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 RPS10P46783 165 aaKnown RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 YAP1P46937 504 aaKnown RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 IDH2P48735 452 aaKnown RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 CAMLGP49069 296 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 BLVRAP53004 296 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 TMBIM6P55061 237 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 DSCR4P56555 118 aaPredicted RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 ACTC1P68032 377 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 ACTA1P68133 377 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 IL5RAQ01344 420 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 OC90Q02509 493 aaPredicted RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 EGFEM1PQ0D2K5 195 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 ZNF154Q13106 437 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 SELENBP1Q13228 472 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 EIF4EBP1Q13541 118 aaPredicted RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 GINS1Q14691 196 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 QPRTQ15274 297 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 NNATQ16517 81 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 CCDC92Q53HC0 331 aaPredicted RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 TIGD3Q6B0B8 471 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 C3orf33Q6P1S2 294 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms