RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 RIN1Q13671 783 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 TAF9Q16594 264 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 MOGQ16653 247 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 PLAC9Q5JTB6 97 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 AVPI1Q5T686 147 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 SIGIRRQ6IA17 410 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 ZNF573Q86YE8 665 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 SNX29P2Q8IUI4 249 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 CROCCP3Q8IVE0 287 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 CDH26Q8IXH8 852 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 BCL6BQ8N143 479 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-244ENST00000556898 OSR2Q8N2R0 312 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 PNLDC1Q8NA58 520 aaKnown RBP4.43□□□□□ -1.7
ATXN3-244ENST00000556898 SPERTQ8NA61 448 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 POC1AQ8NBT0 407 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 DEFB108BQ8NET1 73 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 PXT1Q8NFP0 134 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 OR51T1Q8NGJ9 327 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 CCL17Q92583 94 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 EMG1Q92979 244 aaKnown RBP4.43□□□□□ -1.7
ATXN3-244ENST00000556898 CEP19Q96LK0 163 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 S100A13Q99584 98 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 NRIP2Q9BQI9 281 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 ATG5Q9H1Y0 275 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 MMP27Q9H306 513 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 MS4A5Q9H3V2 200 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 ZMAT3Q9HA38 289 aaKnown RBP4.43□□□□□ -1.7
ATXN3-244ENST00000556898 SAP30LQ9HAJ7 183 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 BARX1Q9HBU1 254 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-244ENST00000556898 DECR2Q9NUI1 292 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 RHBDL2Q9NX52 303 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 NKIRAS2Q9NYR9 191 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 EXTL2Q9UBQ6 330 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 OR14J1Q9UGF5 321 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 IL19Q9UHD0 177 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 ZDHHC8Q9ULC8 765 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 RAI1Q7Z5J4 1906 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-244ENST00000556898 TRAV18A0A075B6X5 111 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 A0A0G2JMP0 313 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 A0A0X1KG70 313 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 MEX3AA1L020 520 aaKnown RBP4.42□□□□□ -1.7
ATXN3-244ENST00000556898 MEIS3P1A6NDR6 274 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 TRAPPC2LH3BP13 241 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 TMEM178BH3BS89 294 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 J3QRK9 145 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 RAB27BO00194 218 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 HSPB6O14558 160 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 FCN3O75636 299 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 RP2O75695 350 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 NXPH2O95156 264 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 LHBP01229 141 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 IGHV4-39P01824 125 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 GYPAP02724 150 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 CSTBP04080 98 aaKnown RBP4.42□□□□□ -1.7
ATXN3-244ENST00000556898 GNB3P16520 340 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 TNFSF4P23510 183 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 CDK2P24941 298 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 TMEM50BP56557 158 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 RPS27AP62979 156 aaKnown RBP4.42□□□□□ -1.7
ATXN3-244ENST00000556898 KRTAP1-1Q07627 177 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 ICAM4Q14773 271 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 CARTPTQ16568 116 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 UBE2NLQ5JXB2 153 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 ATAD3CQ5T2N8 411 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 Q6P435 159 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 MZT2AQ6P582 158 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 LYPD2Q6UXB3 125 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 ACP7Q6ZNF0 438 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 DCDC5Q6ZRR9 648 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 OR2W3Q7Z3T1 314 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 CCDC190Q86UF4 302 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 MKXQ8IYA7 352 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 SAXO1Q8IYX7 474 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 FAM58AQ8N1B3 248 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 BPIFB2Q8N4F0 458 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 CD177Q8N6Q3 437 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 ZSCAN4Q8NAM6 433 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-244ENST00000556898 CHST4Q8NCG5 386 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 OR4M2Q8NGB6 313 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 OR5AN1Q8NGI8 311 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 Q8TCH9 128 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 ACOT12Q8WYK0 555 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 AP3S1Q92572 193 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 PERPQ96FX8 193 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 DIRAS2Q96HU8 199 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 ARHGAP5-AS1Q96IT6 56 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 ABHD1Q96SE0 405 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 CCL19Q99731 98 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 HDHD3Q9BSH5 251 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-244ENST00000556898 TM2D1Q9BX74 207 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 TMEM59Q9BXS4 323 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 EGLN1Q9GZT9 426 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 FN3KRPQ9HA64 309 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 HES4Q9HCC6 221 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 HMG20AQ9NP66 347 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 AKIP1Q9NQ31 210 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 TMEM106BQ9NUM4 274 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 FAIMQ9NVQ4 179 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 ING3Q9NXR8 418 aa4.42□□□□□ -1.7
ATXN3-244ENST00000556898 IL36GQ9NZH8 169 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms