RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 CAB39Q9Y376 341 aaPredicted RBP3.85□□□□□ -1.79
HIF1A-209ENST00000556827 NOP16Q9Y3C1 178 aaKnown RBP3.85□□□□□ -1.79
HIF1A-209ENST00000556827 DNHD1Q96M86 4753 aa3.85□□□□□ -1.79
HIF1A-209ENST00000556827 TRAV40A0A0B4J280 105 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 C5orf51A6NDU8 294 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 CEACAM18A8MTB9 384 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 PHYHO14832 338 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 BCL2L11O43521 198 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 SGCEO43556 437 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 ENSAO43768 121 aaKnown RBP3.84□□□□□ -1.79
HIF1A-209ENST00000556827 GMNNO75496 209 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 NDUFA7O95182 113 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 OR5F1O95221 314 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 IGF2P01344 180 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 WNT2P09544 360 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 OR9G9P0C7N8 305 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 COX5BP10606 129 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 THRBP10828 461 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 KITLGP21583 273 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 RPL4P36578 427 aaKnown RBP3.84□□□□□ -1.79
HIF1A-209ENST00000556827 HTR5AP47898 357 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 ZNF133P52736 654 aaPredicted RBP3.84□□□□□ -1.79
HIF1A-209ENST00000556827 SLC18A1P54219 525 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 ST3GAL3Q11203 375 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 DUSP7Q16829 419 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 DEFB112Q30KQ8 113 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 ANKDD1AQ495B1 522 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 IFI44LQ53G44 452 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 KLF17Q5JT82 389 aaPredicted RBP3.84□□□□□ -1.79
HIF1A-209ENST00000556827 METTL11BQ5VVY1 283 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 EPGNQ6UW88 154 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 DHDDSQ86SQ9 333 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 OAFQ86UD1 273 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 COMTD1Q86VU5 262 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 OR5AS1Q8N127 324 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 CLDN22Q8N7P3 220 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 OR8G5Q8NG78 346 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 TMEM239Q8WW34 195 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 ITLN1Q8WWA0 313 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 DYDC1Q8WWB3 177 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 RASD2Q96D21 266 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 HAVCR1Q96D42 359 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 TECTBQ96PL2 329 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 ECSITQ9BQ95 431 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 SP140LQ9H930 580 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 MARCH7Q9H992 704 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 TMEM100Q9NV29 134 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 PDP1Q9P0J1 537 aaPredicted RBP3.84□□□□□ -1.79
HIF1A-209ENST00000556827 ERVK-18Q9QC07 812 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 RIMS3Q9UJD0 308 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 SPATA2Q9UM82 520 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 STARD10Q9Y365 291 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 GMEB1Q9Y692 573 aa3.84□□□□□ -1.79
HIF1A-209ENST00000556827 FREM1Q5H8C1 2179 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 ALPK2Q86TB3 2170 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 CADP27708 2225 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 MEGF8Q7Z7M0 2845 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 OR6C6A6NF89 314 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 NDUFA2O43678 99 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 FSTL3O95633 263 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 IFI30P13284 250 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 MRPL19P49406 292 aaKnown RBP3.83□□□□□ -1.8
HIF1A-209ENST00000556827 MTPNP58546 118 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 MAGOHP61326 146 aaKnown RBP3.83□□□□□ -1.8
HIF1A-209ENST00000556827 FGF12P61328 243 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 FMODQ06828 376 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 AQP6Q13520 282 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 GK2Q14410 553 aaPredicted RBP3.83□□□□□ -1.8
HIF1A-209ENST00000556827 OR8B8Q15620 311 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 C15orf32Q32M92 178 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 AARDQ4LEZ3 155 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 PAGE3Q5JUK9 113 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF506Q5JVG8 444 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 SLC25A30Q5SVS4 291 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 BRD3OSQ6XYD6 125 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 RBM45Q8IUH3 476 aaKnown RBP3.83□□□□□ -1.8
HIF1A-209ENST00000556827 MSRB3Q8IXL7 192 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 OR51A7Q8NH64 312 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 PFN4Q8NHR9 129 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 TYMSOSQ8TAI1 123 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 SPRYD4Q8WW59 207 aaPredicted RBP3.83□□□□□ -1.8
HIF1A-209ENST00000556827 APOBEC3DQ96AK3 386 aaPredicted RBP3.83□□□□□ -1.8
HIF1A-209ENST00000556827 MRPL53Q96EL3 112 aaKnown RBP3.83□□□□□ -1.8
HIF1A-209ENST00000556827 C1orf147Q96MC9 270 aaPredicted RBP3.83□□□□□ -1.8
HIF1A-209ENST00000556827 CGREF1Q99674 301 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 CITED1Q99966 193 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 TMEM246Q9BRR3 403 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF426Q9BUY5 554 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 PARD6BQ9BYG5 372 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 SLC22A4Q9H015 551 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 RERGLQ9H628 205 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 FN3KRPQ9HA64 309 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 TMEM165Q9HC07 324 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 MEPEQ9NQ76 525 aaPredicted RBP3.83□□□□□ -1.8
HIF1A-209ENST00000556827 POLE4Q9NR33 117 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 ACOXLQ9NUZ1 547 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 TECRQ9NZ01 308 aaKnown RBP3.83□□□□□ -1.8
HIF1A-209ENST00000556827 ARMCX1Q9P291 453 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 AURKCQ9UQB9 309 aa3.83□□□□□ -1.8
HIF1A-209ENST00000556827 UGT2A1Q9Y4X1 527 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms