RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 TRGV10A0A0A0MS01 117 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 CCDC182A6NF36 153 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 ZAR1LA6NP61 321 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 BUB1B-PAK6H3BSN5 160 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 MAGEB4O15481 346 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-223ENST00000556689 SERPINA3P01011 423 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 CD34P28906 385 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 OR3A4PP47883 348 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 GP2P55259 537 aaKnown RBP10.02□□□□□ -0.81
SHMT2-223ENST00000556689 P2RX3P56373 397 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 ZNF146Q15072 292 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 TPTE2P1Q5T6R2 138 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 ZNF322Q6U7Q0 402 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-223ENST00000556689 C18orf65Q6ZTR6 163 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 THNSL2Q86YJ6 484 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 RFKQ969G6 155 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 Q96MT0 163 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 FAM118AQ9NWS6 357 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 TAS2R3Q9NYW6 316 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 H2AFY2Q9P0M6 372 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-223ENST00000556689 BLOC1S6Q9UL45 172 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 MOB4Q9Y3A3 225 aa10.02□□□□□ -0.81
SHMT2-223ENST00000556689 FUOMA2VDF0 154 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 FAM172BPA6NC97 362 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 OOSP1A8MZH6 123 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 LY6LH3BQJ8 138 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 SLC16A6O15403 523 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 CCL1P22362 96 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 OR3A1P47881 315 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 CXCR4P61073 352 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 ZNF91Q05481 1191 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 HLA-DRB5Q30154 266 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 NKAPLQ5M9Q1 402 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 MEDAGQ5VYS4 303 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 PLEKHG7Q6ZR37 379 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 GID4Q8IVV7 300 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 FAM58AQ8N1B3 248 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 COMMD1Q8N668 190 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 KLHL30-AS1Q8NEE0 82 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 OR8J1Q8NGP2 316 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 TRUB1Q8WWH5 349 aaKnown RBP10.01□□□□□ -0.81
SHMT2-223ENST00000556689 BORCS8Q96FH0 119 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 CNBD2Q96M20 576 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 NOL4LQ96MY1 436 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-223ENST00000556689 CNN2Q99439 309 aaKnown RBP10.01□□□□□ -0.81
SHMT2-223ENST00000556689 MNTQ99583 582 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 ANKRD60Q9BZ19 345 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 PLEKHA1Q9HB21 404 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 ZNF286AQ9HBT8 521 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 RBFOX1Q9NWB1 397 aaKnown RBP10.01□□□□□ -0.81
SHMT2-223ENST00000556689 CLN6Q9NWW5 311 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 IL36RNQ9UBH0 155 aa10.01□□□□□ -0.81
SHMT2-223ENST00000556689 SERPINE3A8MV23 424 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 CCL24O00175 119 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 SH2D1BO14796 132 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 SYT7O43581 403 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 GATBO75879 557 aaKnown RBP10□□□□□ -0.81
SHMT2-223ENST00000556689 CYB5AP00167 134 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 NPBWR2P48146 333 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 RAB25P57735 213 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 SLC35B1P78383 322 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 RBM39Q14498 530 aaKnown RBP10□□□□□ -0.81
SHMT2-223ENST00000556689 ODF4Q2M2E3 257 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 ZNF691Q5VV52 312 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 C12orf73Q69YU5 71 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 MEPCEQ7L2J0 689 aaKnown RBP10□□□□□ -0.81
SHMT2-223ENST00000556689 ZNF695Q8IW36 515 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 SLC35F2Q8IXU6 374 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 OR4D6Q8NGJ1 314 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 ASCL2Q99929 193 aa10□□□□□ -0.81
SHMT2-223ENST00000556689 MRM2Q9UI43 246 aaKnown RBP10□□□□□ -0.81
SHMT2-223ENST00000556689 TRBV2A0A0J9YWF9 115 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 IRGMA1A4Y4 181 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 FAM90A18PA6NE21 464 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 FAM90A16PA6NEW6 464 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 FAM90A20PA6NIJ5 464 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 FAM90A9PA6NNJ1 464 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 FAM90A12PA8MX19 464 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 FAM90A5PA8MXJ8 464 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 ZNF670-ZNF695F2Z2N8 137 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 H3BSH0 61 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 ENTPD6O75354 484 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 RPP14O95059 124 aaKnown RBP9.99□□□□□ -0.81
SHMT2-223ENST00000556689 SNRNP70P08621 437 aaKnown RBP9.99□□□□□ -0.81
SHMT2-223ENST00000556689 FAM90A15PP0C7V4 464 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 FAM90A13PP0C7W8 464 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 FAM90A14PP0C7W9 464 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 FAM90A24PP0C7X0 464 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 CALCBP10092 127 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 PRKACAP17612 351 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 BCL3P20749 454 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 GDNFP39905 211 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 GLIPR1P48060 266 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 RBP2P50120 134 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 ATP1B3P54709 279 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 SNU13P55769 128 aaKnown RBP9.99□□□□□ -0.81
SHMT2-223ENST00000556689 ADARB1P78563 741 aaKnown RBP9.99□□□□□ -0.81
SHMT2-223ENST00000556689 AESQ08117 197 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 SPIN3Q5JUX0 258 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 CCDC54Q8NEL0 328 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms