RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 OPN1MW3P0DN78 364 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 MGST1P10620 155 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 SLC25A6P12236 298 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 RPS16P62249 146 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 FGF11Q92914 225 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 SNX22Q96L94 193 aa13.17□□□□□ -0.3
ARHGEF40-207ENST00000556399 PQLC2LA1A4F0 135 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 EDDM3BP56851 147 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 HIST1H2BAQ96A08 127 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 BORCS7Q96B45 105 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 PHF7Q9BWX1 381 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 SIRT7Q9NRC8 400 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 TRDCB7Z8K6 153 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 BTNL8Q6UX41 500 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 OR11L1Q8NGX0 322 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 LHFPL6Q9Y693 200 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 A0A1B0GTI1 187 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 FCGR3AP08637 254 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 GAB4Q2WGN9 574 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 SRCAPQ6ZRS2 3230 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 POC1AQ8NBT0 407 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 HLA-CQ95604 372 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 PACRGQ96M98 296 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 SPATA46Q5T0L3 261 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 OR2M3Q8NG83 312 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 C22orf15Q8WYQ4 148 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 UCN2Q96RP3 112 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 TXN2Q99757 166 aa13.16□□□□□ -0.3
ARHGEF40-207ENST00000556399 A0A087X0M5 115 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 A0A1B0GX30 115 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 PLPPR5Q32ZL2 321 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 RSPO3Q9BXY4 272 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 ZDHHC11Q9H8X9 412 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 CABIN1Q9Y6J0 2220 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 UBE2V2Q15819 145 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 OR10V1Q8NGI7 309 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 SLC25A28Q96A46 364 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 NUDT16L1Q9BRJ7 211 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 ESRP2Q9H6T0 727 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 CCL28Q9NRJ3 127 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 B4DEV8 164 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 PGA4P0DJD7 388 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 PPP1CBP62140 327 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 DBX2Q6ZNG2 339 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 SLC25A22Q9H936 323 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 ERVS71-1P61550 626 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 GNG3P63215 75 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 TMEM211Q6ICI0 200 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 MTCH1Q9NZJ7 389 aa13.15□□□□□ -0.3
ARHGEF40-207ENST00000556399 CRYM-AS1A6NIL9 109 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 CCL2P13500 99 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 IQCJQ1A5X6 159 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 FFAR4Q5NUL3 377 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 CYB561D1Q8N8Q1 229 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR51M1Q9H341 326 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 SMDT1Q9H4I9 107 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 GPR27Q9NS67 375 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 FAM58AQ8N1B3 248 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 ZNF385AQ96PM9 386 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 GPR87Q9BY21 358 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 PCED1AQ9H1Q7 454 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 SLC7A10Q9NS82 523 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 KIAA1456Q9P272 454 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 TRAPPC1Q9Y5R8 145 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 UNC13CQ8NB66 2214 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 TMEM50BP56557 158 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 PMS2P11Q13670 270 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR8B8Q15620 311 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 TRIM61Q5EBN2 209 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR10D3Q8NH80 312 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 CACFD1Q9UGQ2 172 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 NLRC5Q86WI3 1866 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 A0A0U1RQV5 110 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 SYNGR2O43760 224 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 IGHMP01871 453 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 ZNF708P17019 499 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 GPR12P47775 334 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 GALMQ96C23 342 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 FAM103A1Q9BTL3 118 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 DUSP13Q9UII6 198 aa13.14□□□□□ -0.31
ARHGEF40-207ENST00000556399 HEATR5BQ9P2D3 2071 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 KLRC4-KLRK1H3BQV0 150 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 PITX3O75364 302 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 PTBP3O95758 552 aaKnown RBP13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 CEACAM6P40199 344 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 RUNX1Q01196 453 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 C6orf15Q6UXA7 325 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 MELTFP08582 738 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 G0S2P27469 103 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 FHITP49789 147 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 NAT8Q9UHE5 227 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 RAC3P60763 192 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 PTCRAQ6ISU1 281 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 THBS3P49746 956 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 VHLLQ6RSH7 139 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 ZNF439Q8NDP4 499 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 RPH3ALQ9UNE2 315 aa13.13□□□□□ -0.31
ARHGEF40-207ENST00000556399 CST2P09228 141 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms