RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ACSBG2Q5FVE4 666 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 C6orf226Q5I0X4 101 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 DNLZQ5SXM8 178 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 ANKRD22Q5VYY1 191 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 OTPQ5XKR4 325 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 CBLN3Q6UW01 205 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 FAM159AQ6UWV7 190 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 LANCL3Q6ZV70 420 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 CENPUQ71F23 418 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 VN1R4Q7Z5H5 301 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 TMED4Q7Z7H5 227 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 TGIF2LXQ8IUE1 241 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 TMEM156Q8N614 296 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 OR4K15Q8NH41 348 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 OR4L1Q8NH43 312 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 STOML3Q8TAV4 291 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 NUBPLQ8TB37 319 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 DYNC2LI1Q8TCX1 351 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 CDS1Q92903 461 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.2□□□□□ -1.9
PRPF39-209ENST00000556353 TM4SF19Q96DZ7 209 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 C9orf85Q96MD7 179 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 SLC38A2Q96QD8 506 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 OR2V2Q96R30 315 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 STACQ99469 402 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 SERPINI1Q99574 410 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 RBBP8Q99708 897 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 ZNF426Q9BUY5 554 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 AICDAQ9GZX7 198 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 ILKAPQ9H0C8 392 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-209ENST00000556353 KAT8Q9H7Z6 458 aaKnown RBP3.2□□□□□ -1.9
PRPF39-209ENST00000556353 MCCC2Q9HCC0 563 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 MIEF1Q9NQG6 463 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 ZNF282Q9UDV7 671 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-209ENST00000556353 PHF11Q9UIL8 331 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.2□□□□□ -1.9
PRPF39-209ENST00000556353 GOLT1BQ9Y3E0 138 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 DSCAMO60469 2012 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 HIVEP2P31629 2446 aa3.2□□□□□ -1.9
PRPF39-209ENST00000556353 IGLV8-61A0A075B6I0 122 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 PPIAL4EA0A075B759 164 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 KCNE1BA0A087WTH5 132 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 A0A1B0GV90 55 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 C9orf170A2RU37 121 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 FAM25AB3EWG3 89 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 FAM25CB3EWG5 89 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 FAM25GB3EWG6 89 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 IDSB3KWA1 339 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 TRDCB7Z8K6 153 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 G3V3Y1 287 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 K7EP13 123 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 CDC7O00311 574 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 BHLHE40O14503 412 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 IMPA2O14732 288 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 CDIPTO14735 213 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 PRMT5O14744 637 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 IFNA21P01568 189 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 PPIAL4FP0DN26 164 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 CSNK2A2P19784 350 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 PSMB1P20618 241 aaKnown RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 BGNP21810 368 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 STOMP27105 288 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 IMPA1P29218 277 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 SLC6A1P30531 599 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 AQP2P41181 271 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 RFX3P48380 749 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 IDH3GP51553 393 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 NUTF2P61970 127 aaKnown RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 LSM6P62312 80 aaKnown RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 TBPL1P62380 186 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 GNB2P62879 340 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 VLDLRP98155 873 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 FUT7Q11130 342 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 PSG7Q13046 419 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 KRR1Q13601 381 aaKnown RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 SPA17Q15506 151 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 TMEM225Q6GV28 225 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 ADNP2Q6IQ32 1131 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 FAHD2BQ6P2I3 314 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 NIPAL3Q6P499 406 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 DNM1P34Q6PK57 102 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 DHRS4L2Q6PKH6 230 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 TMEM205Q6UW68 189 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 DPY19L4Q7Z388 723 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 ANGPTL5Q86XS5 388 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 CALHM1Q8IU99 346 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 ZFP82Q8N141 532 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 Q8N402 240 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 CSNK1A1LQ8N752 337 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 PRELID2Q8N945 189 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 Q8N9L7 120 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 HSD17B11Q8NBQ5 300 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 RELL2Q8NC24 303 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-209ENST00000556353 MDS2Q8NDY4 140 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 FBXO36Q8NEA4 188 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 PXT1Q8NFP0 134 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 OR7G2Q8NG99 324 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 OR9G4Q8NGQ1 327 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 CD200R1Q8TD46 325 aa3.19□□□□□ -1.9
PRPF39-209ENST00000556353 ITLN2Q8WWU7 325 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms