RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 RBM14Q96PK6 669 aaKnown RBP6.24□□□□□ -1.41
PTCSC3-201ENST00000556013 CITED2Q99967 270 aaPredicted RBP6.24□□□□□ -1.41
PTCSC3-201ENST00000556013 BARHL1Q9BZE3 327 aa6.24□□□□□ -1.41
PTCSC3-201ENST00000556013 ZCCHC4Q9H5U6 513 aa6.24□□□□□ -1.41
PTCSC3-201ENST00000556013 MRPS18AQ9NVS2 196 aaKnown RBP6.24□□□□□ -1.41
PTCSC3-201ENST00000556013 NECAP2Q9NVZ3 263 aa6.24□□□□□ -1.41
PTCSC3-201ENST00000556013 RBFOX1Q9NWB1 397 aaKnown RBP6.24□□□□□ -1.41
PTCSC3-201ENST00000556013 HILPDAQ9Y5L2 63 aa6.24□□□□□ -1.41
PTCSC3-201ENST00000556013 DNAH3Q8TD57 4116 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 IGKV1-12A0A0C4DH73 117 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 KBTBD11-OT1A0A1B0GTJ5 212 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 ODAMA1E959 279 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 TMEM212A6NML5 194 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 LY6LH3BQJ8 138 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 BUB1B-PAK6H3BSN5 160 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 TOR1AO14656 332 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 DEGS1O15121 323 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 CIB2O75838 187 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 FADS2O95864 444 aaKnown RBP6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 IGKV1D-12P01611 117 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 CCDC159P0C7I6 412 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 FAM106CPP0CH98 169 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 CDK2P24941 298 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 DUSP1P28562 367 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 C21orf33P30042 268 aaPredicted RBP6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 SLC6A1P30531 599 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 MNDAP41218 407 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 POU3F4P49335 361 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 LOXL3P58215 753 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 NANOS3P60323 173 aaKnown RBP6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 IL13RA2Q14627 380 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 KISS1Q15726 138 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 HLA-DRB5Q30154 266 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 NSUN5P1Q3KNT7 163 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 ARSJQ5FYB0 599 aaPredicted RBP6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 Q6P435 159 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 ASCL4Q6XD76 172 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 TRAPPC6BQ86SZ2 158 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 TMEM219Q86XT9 240 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 BATF2Q8N1L9 274 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 TPRX1Q8N7U7 411 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 OR51T1Q8NGJ9 327 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 OR9G1Q8NH87 305 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 RHOXF1Q8NHV9 184 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 CAPSLQ8WWF8 208 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 RNFT2Q96EX2 444 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 PELI1Q96FA3 418 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 CHST6Q9GZX3 395 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 MMP28Q9H239 520 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 GSTK1Q9Y2Q3 226 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 TSSC4Q9Y5U2 329 aaPredicted RBP6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 KIAA2026Q5HYC2 2103 aa6.23□□□□□ -1.41
PTCSC3-201ENST00000556013 NPIPB11E5RHQ5 1161 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 J3QLW9 94 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 SLC33A1O00400 549 aaPredicted RBP6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 MAGEB3O15480 346 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 SULT1B1O43704 296 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 MMP23AO75900 390 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 APOL3O95236 402 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 ZNF44P15621 663 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 ZNF19P17023 458 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 GABRB1P18505 474 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 GZMHP20718 246 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 PTGFRP43088 359 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 GLIPR1P48060 266 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 ZP1P60852 638 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 AESQ08117 197 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 RAB40BQ12829 278 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 HABP2Q14520 560 aaPredicted RBP6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 CDK5R1Q15078 307 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 C17orf58Q2M2W7 97 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 CCDC58Q4VC31 144 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 KLHL22Q53GT1 634 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 PLA1AQ53H76 456 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 OXLD1Q5BKU9 147 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 KRBOX4Q5JUW0 171 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 TPTE2P1Q5T6R2 138 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 LPCAT4Q643R3 524 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 ZNF529Q6P280 563 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 Q6ZPA2 131 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 Q6ZS46 218 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 OR4X2Q8NGF9 303 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 OR13C3Q8NGS6 347 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 LGALS12Q96DT0 336 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 RCC1LQ96I51 464 aaKnown RBP6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 C4orf36Q96KX1 117 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 ZNF649Q9BS31 505 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 SLC25A33Q9BSK2 321 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 JAM3Q9BX67 310 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 GPR61Q9BZJ8 451 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 IFT22Q9H7X7 185 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 ZFP57Q9NU63 452 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 IL36RNQ9UBH0 155 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 MYRFQ9Y2G1 1151 aa6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 RPL36Q9Y3U8 105 aaKnown RBP6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 AMMECR1Q9Y4X0 333 aaPredicted RBP6.22□□□□□ -1.41
PTCSC3-201ENST00000556013 TCRBV4S1A1TA0A5B7 111 aa6.21□□□□□ -1.42
PTCSC3-201ENST00000556013 H3BSH0 61 aa6.21□□□□□ -1.42
PTCSC3-201ENST00000556013 J3QR06 171 aa6.21□□□□□ -1.42
PTCSC3-201ENST00000556013 SIRPB1O00241 398 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms