RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 UBE2J1Q9Y385 318 aaPredicted RBP6.54□□□□□ -1.36
NEK9-206ENST00000555537 AP4S1Q9Y587 144 aa6.54□□□□□ -1.36
NEK9-206ENST00000555537 A0A1B0GTI1 187 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 ACOD1A6NK06 481 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 PRR23D1E9PI22 279 aaPredicted RBP6.53□□□□□ -1.36
NEK9-206ENST00000555537 H3BN98 237 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 MGST3O14880 152 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 PFDN1O60925 122 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 NOL3O60936 208 aaKnown RBP6.53□□□□□ -1.36
NEK9-206ENST00000555537 IGKV1D-33P01593 117 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 IGKV1-33P01594 117 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 MRPL3P09001 348 aaKnown RBP6.53□□□□□ -1.36
NEK9-206ENST00000555537 PRR23D2P0DMB1 279 aaPredicted RBP6.53□□□□□ -1.36
NEK9-206ENST00000555537 BCL3P20749 454 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 NFYBP25208 207 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 CD34P28906 385 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 OR3A1P47881 315 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 AQP4P55087 323 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 P2RX3P56373 397 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 RPS7P62081 194 aaKnown RBP6.53□□□□□ -1.36
NEK9-206ENST00000555537 ZNF91Q05481 1191 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 GPR50Q13585 617 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 UBE2V2Q15819 145 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 ODF4Q2M2E3 257 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 CXorf66Q5JRM2 361 aaPredicted RBP6.53□□□□□ -1.36
NEK9-206ENST00000555537 ASPHD1Q5U4P2 390 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 SLX4IPQ5VYV7 408 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 CCDC144NLQ6NUI1 221 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 PLEKHG7Q6ZR37 379 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 LINC00299Q6ZSB3 139 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 CPOQ8IVL8 374 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 TOMM40LQ969M1 308 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 RPEQ96AT9 228 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 ISOC1Q96CN7 298 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 NSMCE2Q96MF7 247 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 OR5B12Q96R08 314 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 TM2D3Q9BRN9 247 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 MROQ9BYG7 248 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 PLGRKTQ9HBL7 147 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 RBFOX1Q9NWB1 397 aaKnown RBP6.53□□□□□ -1.36
NEK9-206ENST00000555537 DNAJB9Q9UBS3 223 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 RSL24D1Q9UHA3 163 aaKnown RBP6.53□□□□□ -1.36
NEK9-206ENST00000555537 NUFIP1Q9UHK0 495 aaKnown RBP6.53□□□□□ -1.36
NEK9-206ENST00000555537 COPS3Q9UNS2 423 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 MYRFQ9Y2G1 1151 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 V9GYS6 101 aa6.53□□□□□ -1.36
NEK9-206ENST00000555537 A0A087WXM4 84 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 TRGV10A0A0A0MS01 117 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 IGHV3-72A0A0B4J1Y9 119 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 A0A1W2PPI3 338 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 NCBP2LA6PVI3 153 aaKnown RBP6.52□□□□□ -1.37
NEK9-206ENST00000555537 OOSP1A8MZH6 123 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 CCRL2O00421 344 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 ARPC2O15144 300 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 SRSF10O75494 262 aaKnown RBP6.52□□□□□ -1.37
NEK9-206ENST00000555537 SMIM18P0DKX4 95 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 GP9P14770 177 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 ERP29P30040 261 aaKnown RBP6.52□□□□□ -1.37
NEK9-206ENST00000555537 RANBP1P43487 201 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 SCN1BQ07699 218 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 GINS1Q14691 196 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 SRSF7Q16629 238 aaKnown RBP eCLIP6.52□□□□□ -1.37
NEK9-206ENST00000555537 MICAQ29983 383 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 C17orf58Q2M2W7 97 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 FAM27D1Q5T7N8 215 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 LCN1P1Q5VSP4 162 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 TEX47Q8TBZ9 253 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 PYDC1Q8WXC3 89 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 DCUN1D4Q92564 292 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 CORO2AQ92828 525 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 CREB3L1Q96BA8 519 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 HRASLS5Q96KN8 279 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 APOL4Q9BPW4 351 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 DGCR6LQ9BY27 220 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 RBM38Q9H0Z9 239 aaKnown RBP6.52□□□□□ -1.37
NEK9-206ENST00000555537 GAL3ST2Q9H3Q3 398 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 SPAG4Q9NPE6 437 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 OR52A1Q9UKL2 312 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 IKZF2Q9UKS7 526 aa6.52□□□□□ -1.37
NEK9-206ENST00000555537 PLECQ15149 4684 aaKnown RBP6.52□□□□□ -1.37
NEK9-206ENST00000555537 A0A1W2PPE3 182 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 CCDC160A6NGH7 325 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 LOC110117498-PIK3R3F6TDL0 507 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 J3QR06 171 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 AP4M1O00189 453 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 FGF16O43320 207 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 ENTPD6O75354 484 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 JTBO76095 146 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 PRKACAP17612 351 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 PTGFRP43088 359 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 GPR12P47775 334 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 RIDAP52758 137 aaKnown RBP6.51□□□□□ -1.37
NEK9-206ENST00000555537 FOXE3Q13461 319 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 FHL3Q13643 280 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 LTC4SQ16873 150 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 KIAA2026Q5HYC2 2103 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 DEGS2Q6QHC5 323 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 CYP2R1Q6VVX0 501 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 ZNF554Q86TJ5 538 aa6.51□□□□□ -1.37
NEK9-206ENST00000555537 ZNF679Q8IYX0 411 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms