RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CENPNQ96H22 339 aaPredicted RBP0.5□□□□□ -2.33
SRP54-207ENST00000555535 ZNF625Q96I27 306 aaPredicted RBP0.5□□□□□ -2.33
SRP54-207ENST00000555535 UTP23Q9BRU9 249 aaKnown RBP0.5□□□□□ -2.33
SRP54-207ENST00000555535 TTTY12Q9BZ98 90 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 AICDAQ9GZX7 198 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 COA1Q9GZY4 146 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 SLC25A31Q9H0C2 315 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 EXO5Q9H790 373 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 LZTFL1Q9NQ48 299 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 C12orf4Q9NQ89 552 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 IFNKQ9P0W0 207 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 ANXA10Q9UJ72 324 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 SLC7A11Q9UPY5 501 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 CFL2Q9Y281 166 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 HSPE1-MOB4S4R3N1 261 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 CEP170Q5SW79 1584 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 WDR19Q8NEZ3 1342 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 TRBV24-1A0A075B6N3 115 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 A0A1W2PRF3 423 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 A0A1W2PRM7 423 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 SLC5A10A0PJK1 596 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 IGKV2-29A2NJV5 120 aaPredicted RBP0.49□□□□□ -2.33
SRP54-207ENST00000555535 GMNCA6NCL1 334 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 OR5H14A6NHG9 310 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 NCF1BA6NI72 391 aaPredicted RBP0.49□□□□□ -2.33
SRP54-207ENST00000555535 NCF1CA8MVU1 366 aaPredicted RBP0.49□□□□□ -2.33
SRP54-207ENST00000555535 SEC14L6B5MCN3 397 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 M0QXV9 152 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 UPK1AO00322 258 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 SLC31A1O15431 190 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 GYG2O15488 501 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 SH2D1AO60880 128 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 ALOX12BO75342 701 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 MBP02144 154 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 GYPCP04921 128 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 GUSBP08236 651 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 TACSTD2P09758 323 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 OR5AL1P0C617 328 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 ZNF3P17036 446 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 PRTN3P24158 256 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 GABRA3P34903 492 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 EVI2BP34910 448 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 CCT6AP40227 531 aaKnown RBP0.49□□□□□ -2.33
SRP54-207ENST00000555535 DYNLL1P63167 89 aaKnown RBP0.49□□□□□ -2.33
SRP54-207ENST00000555535 GBE1Q04446 702 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 PRDX4Q13162 271 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 APOFQ13790 326 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 IDI1Q13907 227 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 CASP8Q14790 479 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 ZNF404Q494X3 552 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 ACSBG2Q5FVE4 666 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 SYT6Q5T7P8 510 aaPredicted RBP0.49□□□□□ -2.33
SRP54-207ENST00000555535 CLEC18BQ6UXF7 455 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 TMCO2Q7Z6W1 182 aaPredicted RBP0.49□□□□□ -2.33
SRP54-207ENST00000555535 SETD3Q86TU7 594 aaPredicted RBP0.49□□□□□ -2.33
SRP54-207ENST00000555535 ARHGAP18Q8N392 663 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 GATD1Q8NB37 220 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 OR2M3Q8NG83 312 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 GPR119Q8TDV5 335 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 HIST1H2BAQ96A08 127 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 DDIT4LQ96D03 193 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 ZNF396Q96N95 335 aaPredicted RBP0.49□□□□□ -2.33
SRP54-207ENST00000555535 TSNAXQ99598 290 aaKnown RBP0.49□□□□□ -2.33
SRP54-207ENST00000555535 APOL4Q9BPW4 351 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 CHID1Q9BWS9 393 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 POTEKPQ9BYX7 375 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 IL22Q9GZX6 179 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 ARL6Q9H0F7 186 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 OR2D2Q9H210 308 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 BLZF1Q9H2G9 400 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 FBXL15Q9H469 300 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 PRORYQ9H606 182 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 KIR3DX1Q9H7L2 352 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 SLC23A2Q9UGH3 650 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 CYB5R1Q9UHQ9 305 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 FLVCR2Q9UPI3 526 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 SLC22A14Q9Y267 594 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 CCDC88AQ3V6T2 1871 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 NAV1Q8NEY1 1877 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 FREM1Q5H8C1 2179 aa0.49□□□□□ -2.33
SRP54-207ENST00000555535 DNMT1P26358 1616 aaKnown RBP0.49□□□□□ -2.33
SRP54-207ENST00000555535 DSCAMO60469 2012 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 RP1L1Q8IWN7 2480 aaPredicted RBP0.48□□□□□ -2.33
SRP54-207ENST00000555535 FN1P02751 2386 aaKnown RBP0.48□□□□□ -2.33
SRP54-207ENST00000555535 SDK1Q7Z5N4 2213 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 TTC41PQ6P2S7 1318 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 A0A0J9YYE9 177 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 A0A1W2PRG6 482 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 OR2AT4A6NND4 320 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 C17orf98A8MV24 154 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 H3BRN7 92 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 K7EQS6 105 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 M0R1B8 84 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 TOR1AO14656 332 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 LECT2O14960 151 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 TCAPO15273 167 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 ZNF189O75820 626 aaPredicted RBP0.48□□□□□ -2.33
SRP54-207ENST00000555535 RAB36O95755 333 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 GPR75O95800 540 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 PDYNP01213 254 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms