RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 FBXW12Q6X9E4 464 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 ZNF573Q86YE8 665 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 GALNT14Q96FL9 552 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 OR2J1Q9GZK6 312 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 RIF1Q5UIP0 2472 aaKnown RBP20.72■□□□□ 0.91
TMEM260-207ENST00000555497 GLP1RP43220 463 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 UCP3P55916 312 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 TGFBR3Q03167 851 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 ALKBH6Q3KRA9 238 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 Q6ZS49 121 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 Q6ZT83 130 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 WDR86Q86TI4 376 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 FOXRED2Q8IWF2 684 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 LINC00052Q96N35 136 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 RSRP1Q9BUV0 290 aa20.72■□□□□ 0.91
TMEM260-207ENST00000555497 PRSS44E7EML9 344 aa20.71■□□□□ 0.91
TMEM260-207ENST00000555497 LGALS8O00214 317 aa20.71■□□□□ 0.91
TMEM260-207ENST00000555497 PPYP01298 95 aa20.71■□□□□ 0.91
TMEM260-207ENST00000555497 PPP1CBP62140 327 aa20.71■□□□□ 0.91
TMEM260-207ENST00000555497 IL24Q13007 206 aa20.71■□□□□ 0.91
TMEM260-207ENST00000555497 OR5T2Q8NGG2 359 aa20.71■□□□□ 0.91
TMEM260-207ENST00000555497 PHYHIPLQ96FC7 376 aa20.71■□□□□ 0.91
TMEM260-207ENST00000555497 TAAR6Q96RI8 345 aa20.71■□□□□ 0.91
TMEM260-207ENST00000555497 BARX1Q9HBU1 254 aaPredicted RBP20.71■□□□□ 0.91
TMEM260-207ENST00000555497 HERPUD1Q15011 391 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 SUMF2Q8NBJ7 301 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 PLSCR2Q9NRY7 297 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 KCNIP3Q9Y2W7 256 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 TRIM77I1YAP6 450 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 CEACAM4O75871 244 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 FOXF2Q12947 444 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 SNTB1Q13884 538 aaKnown RBP20.7■□□□□ 0.9
TMEM260-207ENST00000555497 C20orf204Q6ZNR8 217 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 LHFPL5Q8TAF8 219 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 CNTNAP3BQ96NU0 1288 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 AQP10Q96PS8 301 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 CNTNAP3Q9BZ76 1288 aa20.7■□□□□ 0.9
TMEM260-207ENST00000555497 A8MXK9 166 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 HOXD4P09016 255 aaPredicted RBP20.69■□□□□ 0.9
TMEM260-207ENST00000555497 FGF2P09038 288 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 CTRB1P17538 263 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 HERV-K104P61576 105 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 CTRB2Q6GPI1 263 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 LYZL2Q7Z4W2 148 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 FAM58AQ8N1B3 248 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 STOML3Q8TAV4 291 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 NEK7Q8TDX7 302 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 GLYATL2Q8WU03 294 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 CDH20Q9HBT6 801 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 TUBD1Q9UJT1 453 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 SVILO95425 2214 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 TRAV24A0A0B4J272 114 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 HS3ST1O14792 307 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 NOVA1P51513 510 aaKnown RBP20.69■□□□□ 0.9
TMEM260-207ENST00000555497 SRSF7Q16629 238 aaKnown RBP eCLIP20.69■□□□□ 0.9
TMEM260-207ENST00000555497 MSI2Q96DH6 328 aaKnown RBP20.69■□□□□ 0.9
TMEM260-207ENST00000555497 PKIBQ9C010 78 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 MEMO1Q9Y316 297 aa20.69■□□□□ 0.9
TMEM260-207ENST00000555497 CACNA1GO43497 2377 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 IGKV1-6A0A0C4DH72 117 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 AGFG2O95081 481 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 PAN3Q58A45 887 aaKnown RBP20.68■□□□□ 0.9
TMEM260-207ENST00000555497 BVESQ8NE79 360 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 SLC25A40Q8TBP6 338 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 RDH5Q92781 318 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 SHARPINQ9H0F6 387 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 DSPP15924 2871 aaKnown RBP20.68■□□□□ 0.9
TMEM260-207ENST00000555497 ZNF891A8MT65 544 aaPredicted RBP20.68■□□□□ 0.9
TMEM260-207ENST00000555497 IFNA21P01568 189 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 ZP3P21754 424 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 GNRHRP30968 328 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 LIAT1Q6ZQX7 453 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 WDR31Q8NA23 367 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 SARAFQ96BY9 339 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 C18orf12Q96KH6 178 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 DNAJB11Q9UBS4 358 aa20.68■□□□□ 0.9
TMEM260-207ENST00000555497 ZFHX2Q9C0A1 2572 aaPredicted RBP20.67■□□□□ 0.9
TMEM260-207ENST00000555497 INTS1Q8N201 2190 aaKnown RBP20.67■□□□□ 0.9
TMEM260-207ENST00000555497 J3QT63 122 aa20.67■□□□□ 0.9
TMEM260-207ENST00000555497 J3QW42 95 aa20.67■□□□□ 0.9
TMEM260-207ENST00000555497 INO80CQ6PI98 192 aaPredicted RBP20.67■□□□□ 0.9
TMEM260-207ENST00000555497 HSD17B13Q7Z5P4 300 aaPredicted RBP20.67■□□□□ 0.9
TMEM260-207ENST00000555497 IQCF2Q8IXL9 164 aa20.67■□□□□ 0.9
TMEM260-207ENST00000555497 LRTM2Q8N967 370 aa20.67■□□□□ 0.9
TMEM260-207ENST00000555497 MRPL30Q8TCC3 161 aaKnown RBP20.67■□□□□ 0.9
TMEM260-207ENST00000555497 WNT2BQ93097 391 aa20.67■□□□□ 0.9
TMEM260-207ENST00000555497 TP53RKQ96S44 253 aa20.67■□□□□ 0.9
TMEM260-207ENST00000555497 SUCNR1Q9BXA5 334 aa20.67■□□□□ 0.9
TMEM260-207ENST00000555497 SLC5A7Q9GZV3 580 aa20.67■□□□□ 0.9
TMEM260-207ENST00000555497 PLK3Q9H4B4 646 aa20.67■□□□□ 0.9
TMEM260-207ENST00000555497 DLL3Q9NYJ7 618 aa20.67■□□□□ 0.9
TMEM260-207ENST00000555497 GTF3C1Q12789 2109 aa20.67■□□□□ 0.9
TMEM260-207ENST00000555497 PRR33A8MZF0 331 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 TM4SF5O14894 197 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 PET100P0DJ07 73 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 MRPL49Q13405 166 aaKnown RBP20.66■□□□□ 0.9
TMEM260-207ENST00000555497 ACSF3Q4G176 576 aaPredicted RBP20.66■□□□□ 0.9
TMEM260-207ENST00000555497 CCDC36Q8IYA8 594 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 IGHV3-64DA0A0J9YX35 117 aa20.66■□□□□ 0.9
TMEM260-207ENST00000555497 TRDCB7Z8K6 153 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms