RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 NAAAQ02083 359 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 ASCL4Q6XD76 172 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 MOB3CQ70IA8 216 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 KCTD9Q7L273 389 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 BVESQ8NE79 360 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 PXT1Q8NFP0 134 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 CASTOR1Q8WTX7 329 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 CHMP1AQ9HD42 196 aaPredicted RBP14.87□□□□□ -0.03
SHOX-204ENST00000554971 PCDHB16Q9NRJ7 776 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 C5orf51A6NDU8 294 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 OR6C6A6NF89 314 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 PDZD2O15018 2839 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 RLN2P04090 185 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 ALKBH2Q6NS38 261 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 MYPOPQ86VE0 399 aaPredicted RBP14.86□□□□□ -0.03
SHOX-204ENST00000554971 CSNK2A3Q8NEV1 391 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 MRPS24Q96EL2 167 aaKnown RBP14.86□□□□□ -0.03
SHOX-204ENST00000554971 CXorf58Q96LI9 332 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 ARPC5LQ9BPX5 153 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 ATPIF1Q9UII2 106 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 AKAP9Q99996 3911 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 A0A1W2PP11 408 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 FAM25EA8MYX2 175 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 LYL1P12980 280 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 ANOS1P23352 680 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 CHRFAM7AQ494W8 412 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 TMEM42Q69YG0 159 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 LHFPL2Q6ZUX7 228 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 C1QL2Q7Z5L3 287 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 WFDC8Q8IUA0 241 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 STOML3Q8TAV4 291 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 Q96M66 194 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 ZNF75AQ96N20 296 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 USB1Q9BQ65 265 aaKnown RBP14.86□□□□□ -0.03
SHOX-204ENST00000554971 C1QTNF6Q9BXI9 259 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 NAV2Q8IVL1 2488 aa14.86□□□□□ -0.03
SHOX-204ENST00000554971 TEX15Q9BXT5 2789 aa14.85□□□□□ -0.03
SHOX-204ENST00000554971 TEX13DA0A0J9YY54 714 aaPredicted RBP14.85□□□□□ -0.03
SHOX-204ENST00000554971 C5orf63A6NC05 138 aa14.85□□□□□ -0.03
SHOX-204ENST00000554971 DEFB108AA8MXU0 73 aa14.85□□□□□ -0.03
SHOX-204ENST00000554971 CCSO14618 274 aa14.85□□□□□ -0.03
SHOX-204ENST00000554971 BET1O15155 118 aa14.85□□□□□ -0.03
SHOX-204ENST00000554971 MMP7P09237 267 aaPredicted RBP14.85□□□□□ -0.03
SHOX-204ENST00000554971 SERPINF1P36955 418 aa14.85□□□□□ -0.03
SHOX-204ENST00000554971 PAN3Q58A45 887 aaKnown RBP14.85□□□□□ -0.03
SHOX-204ENST00000554971 TMEM230Q96A57 120 aa14.85□□□□□ -0.03
SHOX-204ENST00000554971 RTBDNQ9BSG5 229 aaPredicted RBP14.85□□□□□ -0.03
SHOX-204ENST00000554971 ST6GALNAC5Q9BVH7 336 aa14.85□□□□□ -0.03
SHOX-204ENST00000554971 DECR2Q9NUI1 292 aa14.85□□□□□ -0.03
SHOX-204ENST00000554971 TMA7Q9Y2S6 64 aaKnown RBP14.85□□□□□ -0.03
SHOX-204ENST00000554971 PET100P0DJ07 73 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 SERPINA2P20848 420 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 DTYMKP23919 212 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 LOXP28300 417 aaPredicted RBP14.84□□□□□ -0.03
SHOX-204ENST00000554971 NPY4RP50391 375 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 MTCP1P56278 107 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 AADACL3Q5VUY0 350 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 MDP1Q86V88 176 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 CCDC36Q8IYA8 594 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 ZNF295-AS1Q8N0V1 137 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 OR13G1Q8NGZ3 307 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 FAM222BQ8WU58 562 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 MUCL1Q96DR8 90 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 REEP6Q96HR9 211 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 SHARPINQ9H0F6 387 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 IL36GQ9NZH8 169 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 AMDHD2Q9Y303 409 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 SPEF1Q9Y4P9 236 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 F8VVB4 439 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 F8VWA3 439 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 IGKV3-15P01624 115 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 CELA3BP08861 270 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 HOXB1P14653 301 aaPredicted RBP14.84□□□□□ -0.03
SHOX-204ENST00000554971 HOXC12P31275 282 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 PMELP40967 661 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 ZNF787Q6DD87 383 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 STPG2Q8N412 459 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 ZNF471Q9BX82 626 aaPredicted RBP14.84□□□□□ -0.03
SHOX-204ENST00000554971 OBP2BQ9NPH6 170 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 PLEKHJ1Q9NW61 149 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 EHFQ9NZC4 300 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 MBD2Q9UBB5 411 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 C14orf166Q9Y224 244 aaKnown RBP14.84□□□□□ -0.03
SHOX-204ENST00000554971 CCDC168Q8NDH2 2452 aa14.84□□□□□ -0.03
SHOX-204ENST00000554971 CSTBP04080 98 aaKnown RBP14.83□□□□□ -0.04
SHOX-204ENST00000554971 SERPINA5P05154 406 aa14.83□□□□□ -0.04
SHOX-204ENST00000554971 DBHP09172 617 aa14.83□□□□□ -0.04
SHOX-204ENST00000554971 TMEM225BP0DP42 221 aa14.83□□□□□ -0.04
SHOX-204ENST00000554971 COX6B1P14854 86 aa14.83□□□□□ -0.04
SHOX-204ENST00000554971 RBP2P50120 134 aa14.83□□□□□ -0.04
SHOX-204ENST00000554971 UBE2NP61088 152 aaKnown RBP14.83□□□□□ -0.04
SHOX-204ENST00000554971 SNAI3Q3KNW1 292 aa14.83□□□□□ -0.04
SHOX-204ENST00000554971 OR5D18Q8NGL1 313 aa14.83□□□□□ -0.04
SHOX-204ENST00000554971 OR10K1Q8NGX5 313 aa14.83□□□□□ -0.04
SHOX-204ENST00000554971 DNAJB11Q9UBS4 358 aa14.83□□□□□ -0.04
SHOX-204ENST00000554971 C13orf42A0A1B0GVH6 325 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.82□□□□□ -0.04
SHOX-204ENST00000554971 A0A1W2PPR1 153 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 FAM221AA4D161 298 aa14.82□□□□□ -0.04
SHOX-204ENST00000554971 FARS2O95363 451 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms