RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ACER2Q5QJU3 275 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 RHBDD2Q6NTF9 364 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 MISP3Q96FF7 219 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 SF3B5Q9BWJ5 86 aaKnown RBP12.32□□□□□ -0.44
VTI1B-204ENST00000554659 TRDCB7Z8K6 153 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 SPRY3O43610 288 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 C9orf50Q5SZB4 431 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 GPA33Q99795 319 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 HES7Q9BYE0 225 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 LIPGQ9Y5X9 500 aa12.32□□□□□ -0.44
VTI1B-204ENST00000554659 DEFB108AA8MXU0 73 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 VDAC1P21796 283 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 OR10AC1Q8NH08 325 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 SNX22Q96L94 193 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 TMEM191AQ9H0A3 160 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 PARP11Q9NR21 331 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 MIOXQ9UGB7 285 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 SYNGR2O43760 224 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 RAC3P60763 192 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 LBHQ53QV2 105 aaPredicted RBP12.31□□□□□ -0.44
VTI1B-204ENST00000554659 Q56UQ5 140 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 C1QL3Q5VWW1 255 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 SLC36A1Q7Z2H8 476 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 PTX4Q96A99 478 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 ANAPC16Q96DE5 110 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 SARGQ9BW04 601 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 NXPH1P58417 271 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 EIF4EBP2Q13542 120 aaPredicted RBP12.31□□□□□ -0.44
VTI1B-204ENST00000554659 DEFB109BQ30KR1 87 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 SPINK9Q5DT21 86 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 LHFPL5Q8TAF8 219 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 FBLIM1Q8WUP2 373 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 KIF13BQ9NQT8 1826 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 MFNGO00587 321 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 BGLAPP02818 100 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 FNDC7Q5VTL7 733 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 TMEM92Q6UXU6 159 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 RNF133Q8WVZ7 376 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 CLEC5AQ9NY25 188 aa12.31□□□□□ -0.44
VTI1B-204ENST00000554659 CELA2BP08218 269 aaPredicted RBP12.3□□□□□ -0.44
VTI1B-204ENST00000554659 ACAA2P42765 397 aaKnown RBP12.3□□□□□ -0.44
VTI1B-204ENST00000554659 COL19A1Q14993 1142 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 SIRT7Q9NRC8 400 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 GPR27Q9NS67 375 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 SULT1A1P50225 295 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 DPPA3Q6W0C5 159 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 C16orf47Q6ZP98 133 aaPredicted RBP12.3□□□□□ -0.44
VTI1B-204ENST00000554659 NRTNQ99748 197 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 RPP25Q9BUL9 199 aaKnown RBP12.3□□□□□ -0.44
VTI1B-204ENST00000554659 DOK5Q9P104 306 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 TRAV17A0A0B4J275 112 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 C7orf77A4D0Y5 90 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 ADAM11O75078 769 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 PTP4A3O75365 173 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 GOSR1O95249 250 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 GNG10P50151 68 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 TCL1AP56279 114 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 LSM11P83369 360 aaKnown RBP eCLIP12.3□□□□□ -0.44
VTI1B-204ENST00000554659 FOXO1Q12778 655 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 LYG1Q8N1E2 194 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 SLC26A10Q8NG04 563 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 MYOZ1Q9NP98 299 aaPredicted RBP12.3□□□□□ -0.44
VTI1B-204ENST00000554659 PRR13Q9NZ81 148 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 TNFSF18Q9UNG2 199 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 CDS2O95674 445 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 ACAA1P09110 424 aaPredicted RBP12.3□□□□□ -0.44
VTI1B-204ENST00000554659 EIF3IQ13347 325 aaKnown RBP12.3□□□□□ -0.44
VTI1B-204ENST00000554659 ZNF766Q5HY98 468 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 ZAR1Q86SH2 424 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 OR4A4PQ8NGN8 299 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 ELOVL1Q9BW60 279 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 SH2D2AQ9NP31 389 aa12.3□□□□□ -0.44
VTI1B-204ENST00000554659 IGHV1OR15-9A0A0B4J2B8 117 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 ZFP36L2P47974 494 aaKnown RBP12.29□□□□□ -0.44
VTI1B-204ENST00000554659 MMP16P51512 607 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 SSPNQ14714 243 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 VSIG8P0DPA2 414 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 CD40P25942 277 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 SLC7A10Q9NS82 523 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 PLA2G3Q9NZ20 509 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 CES1P1Q9UKY3 287 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 NINQ8N4C6 2090 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 OR3A1P47881 315 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 TMEM116Q8NCL8 245 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 MRPL24Q96A35 216 aaKnown RBP12.29□□□□□ -0.44
VTI1B-204ENST00000554659 HSD17B10Q99714 261 aaKnown RBP12.29□□□□□ -0.44
VTI1B-204ENST00000554659 MFRPQ9BY79 579 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 CA10Q9NS85 328 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 PCOLCE2Q9UKZ9 415 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 MNX1P50219 401 aaPredicted RBP12.29□□□□□ -0.44
VTI1B-204ENST00000554659 ZNF260Q3ZCT1 412 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 COX19Q49B96 90 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 TSPO2Q5TGU0 170 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 SCGB1D4Q6XE38 83 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 NAGKQ9UJ70 344 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 AMDHD2Q9Y303 409 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 CHST1O43916 411 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 PPYP01298 95 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 SEC11BP0C7V7 166 aa12.29□□□□□ -0.44
VTI1B-204ENST00000554659 HLA-DRB5Q30154 266 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms