RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 POMT1Q9Y6A1 747 aa8.7□□□□□ -1.02
SHMT2-215ENST00000554656 A0A1B0GUS0 222 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 hCG_1807616A0A1W2PRN6 198 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 CLPSL1A2RUU4 121 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 FAM25AB3EWG3 89 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 FAM25CB3EWG5 89 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 FAM25GB3EWG6 89 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 MAGEB3O15480 346 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 PAHP00439 452 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 LIPFP07098 398 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 UBBP0CG47 229 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 SELLP14151 372 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 SNRPBP14678 240 aaKnown RBP8.69□□□□□ -1.02
SHMT2-215ENST00000554656 ELK1P19419 428 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 AMY2BP19961 511 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 PROK1P58294 105 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 FAM3AP98173 230 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 KCNJ8Q15842 424 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 ZNF79Q15937 498 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 HES5Q5TA89 166 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 METTL11BQ5VVY1 283 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 TMEM42Q69YG0 159 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 PYHIN1Q6K0P9 492 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 FAM131AQ6UXB0 335 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 LDLRAD3Q86YD5 345 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 PDZD9Q8IXQ8 264 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 FAM216BQ8N7L0 139 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 PNLDC1Q8NA58 520 aaKnown RBP8.69□□□□□ -1.02
SHMT2-215ENST00000554656 MINDY2Q8NBR6 621 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 CSNK2A3Q8NEV1 391 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 OR13C9Q8NGT0 318 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 LINC01006Q8NI28 216 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 LGALS14Q8TCE9 139 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 LRRC29Q8WV35 223 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 SSMEM1Q8WWF3 244 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 ST8SIA4Q92187 359 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 SPSB1Q96BD6 273 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 FGF23Q9GZV9 251 aaPredicted RBP8.69□□□□□ -1.02
SHMT2-215ENST00000554656 LIN7BQ9HAP6 207 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 KAAG1Q9UBP8 84 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 EXTL2Q9UBQ6 330 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 FBLN5Q9UBX5 448 aa8.69□□□□□ -1.02
SHMT2-215ENST00000554656 RPUSD1Q9UJJ7 312 aaKnown RBP8.69□□□□□ -1.02
SHMT2-215ENST00000554656 A0A0A6YYH2 397 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 ZNF816-ZNF321PA0A0X1KG74 233 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 A6NJ64 397 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 H3BSH0 61 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 CTDSPLO15194 276 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 NDUFA2O43678 99 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 SCGNO76038 276 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 BPNT1O95861 308 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 TFF1P04155 84 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 CRYBA1P05813 215 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 EIF4EP06730 217 aaKnown RBP8.68□□□□□ -1.02
SHMT2-215ENST00000554656 RAB6AP20340 208 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 PRKACBP22694 351 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 IER3P46695 156 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 GSK3AP49840 483 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 MRPS10P82664 201 aaKnown RBP8.68□□□□□ -1.02
SHMT2-215ENST00000554656 PITPNAQ00169 270 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 KLRD1Q13241 179 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 PDCD1Q15116 288 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 CNN3Q15417 329 aaKnown RBP8.68□□□□□ -1.02
SHMT2-215ENST00000554656 FAM189A2Q15884 450 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 GFOD2Q3B7J2 385 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 CLVS2Q5SYC1 327 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 HACD4Q5VWC8 232 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 WDR82Q6UXN9 313 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 C17orf107Q6ZR85 190 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 VMO1Q7Z5L0 202 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 FTMTQ8N4E7 242 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 JAGN1Q8N5M9 183 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 SPERTQ8NA61 448 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 LY6G5BQ8NDX9 201 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 DNAAF1Q8NEP3 725 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 OR51A2Q8NGJ7 313 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 OR5H6Q8NGV6 325 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 SETD6Q8TBK2 473 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 DYRK2Q92630 601 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 FAM3DQ96BQ1 224 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 S100A16Q96FQ6 103 aaKnown RBP8.68□□□□□ -1.02
SHMT2-215ENST00000554656 CCL13Q99616 98 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 RHBDL2Q9NX52 303 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 GHRLQ9UBU3 117 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 PIGLQ9Y2B2 252 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 RHBDD3Q9Y3P4 386 aa8.68□□□□□ -1.02
SHMT2-215ENST00000554656 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.67□□□□□ -1.02
SHMT2-215ENST00000554656 VGLL3A8MV65 326 aa8.67□□□□□ -1.02
SHMT2-215ENST00000554656 LDLRAD4O15165 306 aa8.67□□□□□ -1.02
SHMT2-215ENST00000554656 TSPAN15O95858 294 aa8.67□□□□□ -1.02
SHMT2-215ENST00000554656 HLA-DQB1P01920 261 aa8.67□□□□□ -1.02
SHMT2-215ENST00000554656 FAHP16930 419 aa8.67□□□□□ -1.02
SHMT2-215ENST00000554656 ACKR3P25106 362 aa8.67□□□□□ -1.02
SHMT2-215ENST00000554656 AZGP1P25311 298 aaKnown RBP8.67□□□□□ -1.02
SHMT2-215ENST00000554656 ZNF93P35789 620 aaPredicted RBP8.67□□□□□ -1.02
SHMT2-215ENST00000554656 POU3F4P49335 361 aa8.67□□□□□ -1.02
SHMT2-215ENST00000554656 DEFA1P59665 94 aa8.67□□□□□ -1.02
SHMT2-215ENST00000554656 DEFA3P59666 94 aa8.67□□□□□ -1.02
SHMT2-215ENST00000554656 RPL15P61313 204 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms