RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 LINC00862A6NCI5 91 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 OR6C68A6NDL8 312 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 OOEPA6NGQ2 149 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 SNRPGP15A8MWD9 76 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 M0R135 149 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 DCTN6O00399 190 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 TNFRSF13BO14836 293 aaPredicted RBP7.31□□□□□ -1.24
TDP1-208ENST00000553989 LANCL1O43813 399 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 GPR137BO60478 399 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 PEX14O75381 377 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 BPNT1O95861 308 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 IGHV1-69P01742 117 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 IGHV4-59P01825 116 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 GYPAP02724 150 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 GRPP07492 148 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 ZNF823P16415 610 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 M6PRP20645 277 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 PSMB10P40306 273 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 CAPZA1P52907 286 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 OR10A3P58181 314 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 RAB14P61106 215 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 RPL15P61313 204 aaKnown RBP7.31□□□□□ -1.24
TDP1-208ENST00000553989 ARF6P62330 175 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 ALKBH1Q13686 389 aaKnown RBP7.31□□□□□ -1.24
TDP1-208ENST00000553989 Q499Y3 187 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 Q5BKY6 102 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 BCL2L15Q5TBC7 163 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 LAMTOR1Q6IAA8 161 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 DHRS7BQ6IAN0 325 aaPredicted RBP7.31□□□□□ -1.24
TDP1-208ENST00000553989 SLC18B1Q6NT16 456 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 FDX2Q6P4F2 183 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 C1QL4Q86Z23 238 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 CMTM4Q8IZR5 234 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 C9orf62Q8N4C0 152 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 OR5H6Q8NGV6 325 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 OR5AK2Q8NH90 309 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 C17orf50Q8WW18 174 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 ST8SIA4Q92187 359 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 SPTSSAQ969W0 71 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 PHF21AQ96BD5 680 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 ZNF799Q96GE5 643 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 TBX15Q96SF7 602 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 COMMD4Q9H0A8 199 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 PRDM13Q9H4Q3 707 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 PLSCR3Q9NRY6 295 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 NUDT15Q9NV35 164 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 C1orf123Q9NWV4 160 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 FRRS1LQ9P0K9 344 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 MGAT4AQ9UM21 535 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 B9D1Q9UPM9 204 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 AK6Q9Y3D8 172 aaKnown RBP7.31□□□□□ -1.24
TDP1-208ENST00000553989 PKD1L1Q8TDX9 2849 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 DOCK11Q5JSL3 2073 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 TRAV6A0A075B6T7 132 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 IGLV1-36A0A0B4J1U3 117 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 TRBV5-5A0A0J9YX44 114 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 A0A0U1RQK1 487 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 MEGF11A6BM72 1044 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 TMEM212A6NML5 194 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 CD300LBA8K4G0 201 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 ADARB2-AS1A8MUL3 147 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 NDUFA2O43678 99 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 SSNA1O43805 119 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 GMDSO60547 372 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 RBBP9O75884 186 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 SLC22A5O76082 557 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 CD3GP09693 182 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 CLUP10909 449 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 SNRPBP14678 240 aaKnown RBP7.3□□□□□ -1.24
TDP1-208ENST00000553989 MMP9P14780 707 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 GDNFP39905 211 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 HTR2BP41595 481 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 OR3A3P47888 321 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 MECP2P51608 486 aaKnown RBP7.3□□□□□ -1.24
TDP1-208ENST00000553989 HIST1H3AP68431 136 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 MZT1Q08AG7 82 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 DBPQ10586 325 aaPredicted RBP7.3□□□□□ -1.24
TDP1-208ENST00000553989 TAF13Q15543 124 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 TAF9Q16594 264 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 C6orf183Q5T699 404 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 ZBTB37Q5TC79 503 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 HIST2H3PS2Q5TEC6 136 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 COLCA1Q6ZS62 124 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 HIST2H3AQ71DI3 136 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 REC114Q7Z4M0 266 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 NAA40Q86UY6 237 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 SDR9C7Q8NEX9 313 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 SLC26A10Q8NG04 563 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 OR8H1Q8NGG4 311 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 OR8S1Q8NH09 359 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 OR2AE1Q8NHA4 323 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 LINC01006Q8NI28 216 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 FAM110DQ8TAY7 271 aaPredicted RBP7.3□□□□□ -1.24
TDP1-208ENST00000553989 GPR148Q8TDV2 347 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 DERL3Q96Q80 235 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 HRASLSQ9HDD0 168 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 ONECUT1Q9UBC0 465 aa7.3□□□□□ -1.24
TDP1-208ENST00000553989 ELF5Q9UKW6 265 aaPredicted RBP7.3□□□□□ -1.24
TDP1-208ENST00000553989 IGHV3OR15-7A0A075B7D8 119 aa7.29□□□□□ -1.24
TDP1-208ENST00000553989 A0A1B0GWJ7 208 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms