RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 NKAIN3Q8N8D7 197 aa19.05■□□□□ 0.64
NEK9-203ENST00000553945 OR51T1Q8NGJ9 327 aa19.05■□□□□ 0.64
NEK9-203ENST00000553945 YTHDF1Q9BYJ9 559 aaKnown RBP19.05■□□□□ 0.64
NEK9-203ENST00000553945 A0A0U1RQK1 487 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 hADV38S2A0JD32 116 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 MEGF11A6BM72 1044 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 DNAJC9-AS1A6NH13 148 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 MRPS14O60783 128 aaKnown RBP19.04■□□□□ 0.64
NEK9-203ENST00000553945 P2RX3P56373 397 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 ERVFRD-1P60508 538 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 EMX1Q04741 257 aaPredicted RBP19.04■□□□□ 0.64
NEK9-203ENST00000553945 IL13RA2Q14627 380 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 SLC22A6Q4U2R8 563 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 HSD17B12Q53GQ0 312 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 PNKDQ8N490 385 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 PIP4P2Q8N4L2 257 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 SVOPQ8N4V2 548 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 ZFAND2BQ8WV99 257 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 PPIL3Q9H2H8 161 aaKnown RBP19.04■□□□□ 0.64
NEK9-203ENST00000553945 PCDHB16Q9NRJ7 776 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 ST3GAL6Q9Y274 331 aa19.04■□□□□ 0.64
NEK9-203ENST00000553945 DNHD1Q96M86 4753 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 HSPB6O14558 160 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 NPFFO15130 113 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 ZNF780AO75290 641 aaPredicted RBP19.03■□□□□ 0.64
NEK9-203ENST00000553945 SC5DO75845 299 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 ZNF728P0DKX0 622 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 ERP29P30040 261 aaKnown RBP19.03■□□□□ 0.64
NEK9-203ENST00000553945 UBE2E1P51965 193 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 DLX6P56179 175 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 UBA52P62987 128 aaKnown RBP19.03■□□□□ 0.64
NEK9-203ENST00000553945 AESQ08117 197 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 AWAT2Q6E213 333 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 GLIPR1L1Q6UWM5 242 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 TCF23Q7RTU1 214 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 C11orf42Q8N5U0 333 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.03■□□□□ 0.64
NEK9-203ENST00000553945 PHYHIPQ92561 330 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 ZNF714Q96N38 554 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 ING3Q9NXR8 418 aa19.03■□□□□ 0.64
NEK9-203ENST00000553945 DSCAML1Q8TD84 2053 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 A0A1W2PP11 408 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 FUOMA2VDF0 154 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 C17orf98A8MV24 154 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 UCHL1P09936 223 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 SRMP19623 302 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 PSMA1P25786 263 aaKnown RBP19.02■□□□□ 0.64
NEK9-203ENST00000553945 RBM11P57052 281 aaKnown RBP19.02■□□□□ 0.64
NEK9-203ENST00000553945 GPR176Q14439 515 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 ATXN7L3Q14CW9 347 aaPredicted RBP19.02■□□□□ 0.64
NEK9-203ENST00000553945 PAN3Q58A45 887 aaKnown RBP19.02■□□□□ 0.64
NEK9-203ENST00000553945 HCP5Q6MZN7 132 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 TMEM91Q6ZNR0 172 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 TRAPPC6BQ86SZ2 158 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 LRRTM1Q86UE6 522 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 OR4D6Q8NGJ1 314 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 C1orf147Q96MC9 270 aaPredicted RBP19.02■□□□□ 0.64
NEK9-203ENST00000553945 UQCC2Q9BRT2 126 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 SLITRK2Q9H156 845 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 HEXA-AS1Q9H8Q6 139 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 SF3B6Q9Y3B4 125 aaKnown RBP19.02■□□□□ 0.64
NEK9-203ENST00000553945 FAM96BQ9Y3D0 163 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 LINC00312Q9Y6C7 94 aa19.02■□□□□ 0.64
NEK9-203ENST00000553945 TRAV24A0A0B4J272 114 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 GTF2F2P13984 249 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 COX7A1P24310 79 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 GLIPR1P48060 266 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 FABP5Q01469 135 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 NHLRC3Q5JS37 347 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 KRBOX4Q5JUW0 171 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 ZNF782Q6ZMW2 699 aaPredicted RBP19.01■□□□□ 0.63
NEK9-203ENST00000553945 LYPD6Q86Y78 171 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 SPARTQ8N0X7 666 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 FAM216AQ8WUB2 273 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 PRDM13Q9H4Q3 707 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 LRRC42Q9Y546 428 aa19.01■□□□□ 0.63
NEK9-203ENST00000553945 MEIOCA2RUB1 952 aa19■□□□□ 0.63
NEK9-203ENST00000553945 GEMIN2O14893 280 aaKnown RBP19■□□□□ 0.63
NEK9-203ENST00000553945 HOXA3O43365 443 aaPredicted RBP19■□□□□ 0.63
NEK9-203ENST00000553945 OR7C1O76099 320 aaPredicted RBP19■□□□□ 0.63
NEK9-203ENST00000553945 CSN2P05814 226 aa19■□□□□ 0.63
NEK9-203ENST00000553945 GABRA5P31644 462 aa19■□□□□ 0.63
NEK9-203ENST00000553945 SLC9A3R2Q15599 337 aa19■□□□□ 0.63
NEK9-203ENST00000553945 Q6YL49 198 aa19■□□□□ 0.63
NEK9-203ENST00000553945 COQ2Q96H96 371 aa19■□□□□ 0.63
NEK9-203ENST00000553945 ZMAT3Q9HA38 289 aaKnown RBP19■□□□□ 0.63
NEK9-203ENST00000553945 TNFRSF19Q9NS68 423 aa19■□□□□ 0.63
NEK9-203ENST00000553945 ZNF581Q9P0T4 197 aa19■□□□□ 0.63
NEK9-203ENST00000553945 TRGV10A0A0A0MS01 117 aa18.99■□□□□ 0.63
NEK9-203ENST00000553945 ODAMA1E959 279 aa18.99■□□□□ 0.63
NEK9-203ENST00000553945 RRP9O43818 475 aaKnown RBP18.99■□□□□ 0.63
NEK9-203ENST00000553945 ARL6IP5O75915 188 aa18.99■□□□□ 0.63
NEK9-203ENST00000553945 RBP4P02753 201 aa18.99■□□□□ 0.63
NEK9-203ENST00000553945 MELTFP08582 738 aa18.99■□□□□ 0.63
NEK9-203ENST00000553945 SAA4P35542 130 aa18.99■□□□□ 0.63
NEK9-203ENST00000553945 SSX1Q16384 188 aa18.99■□□□□ 0.63
NEK9-203ENST00000553945 GLT8D1Q68CQ7 371 aa18.99■□□□□ 0.63
NEK9-203ENST00000553945 LINC00596Q86U02 117 aa18.99■□□□□ 0.63
NEK9-203ENST00000553945 SLC25A28Q96A46 364 aa18.99■□□□□ 0.63
NEK9-203ENST00000553945 FOXRED1Q96CU9 486 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms